RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 TCEA2Q15560 299 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 TBCCQ15814 346 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 LSM12Q3MHD2 195 aaKnown RBP11.39□□□□□ -0.59
CLN6-223ENST00000637823 PLK5Q496M5 336 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 XKR6Q5GH73 641 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 SPDYAQ5MJ70 313 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 NXNQ6DKJ4 435 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 LAYNQ6UX15 382 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 SLCO4C1Q6ZQN7 724 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 ALYREFQ86V81 257 aaKnown RBP11.39□□□□□ -0.59
CLN6-223ENST00000637823 GKN2Q86XP6 184 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 DDIASQ8IXT1 998 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 FITM2Q8N6M3 262 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 OR52E1Q8NGJ3 308 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 OR2L8Q8NGY9 312 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 SH3KBP1Q96B97 665 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 C19orf60Q96EN9 201 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 PPP1R36Q96LQ0 422 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 IL17FQ96PD4 163 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 OR52B2Q96RD2 323 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 LRRC61Q9BV99 259 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 MYLK2Q9H1R3 596 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 TUBB1Q9H4B7 451 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 EHD1Q9H4M9 534 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 ABCF3Q9NUQ8 709 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 ZSCAN32Q9NX65 697 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 SUSD2Q9UGT4 822 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 ZFP69BQ9UJL9 534 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 SNX6Q9UNH7 406 aa11.39□□□□□ -0.59
CLN6-223ENST00000637823 SNRNP200O75643 2136 aaKnown RBP11.39□□□□□ -0.59
CLN6-223ENST00000637823 TRBV23OR9-2A0A075B6M9 112 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 KCNE1BA0A087WTH5 132 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 SERTM1A2A2V5 107 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 MANBAO00462 879 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 VIPP01282 170 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 LINC00032P0C843 101 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 C1GALT1C1LP0DN25 315 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 JUPP14923 745 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 NCF2P19878 526 aaPredicted RBP11.38□□□□□ -0.59
CLN6-223ENST00000637823 AVPR2P30518 371 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 SHMT2P34897 504 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 ZNF33BQ06732 778 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 SRSF5Q13243 272 aaKnown RBP11.38□□□□□ -0.59
CLN6-223ENST00000637823 LAPTM5Q13571 262 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 TSTA3Q13630 321 aaPredicted RBP11.38□□□□□ -0.59
CLN6-223ENST00000637823 DOC2AQ14183 400 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 E2F2Q14209 437 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 PRAMEF14Q5SWL7 426 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 THEMIS2Q5TEJ8 643 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 PRAMEF13Q5VWM6 474 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 ATG9BQ674R7 924 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 GRHL2Q6ISB3 625 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 IL27RAQ6UWB1 636 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 SUSD1Q6UWL2 747 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 CCDC121Q6ZUS5 278 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 LARP4Q71RC2 724 aaKnown RBP eCLIP11.38□□□□□ -0.59
CLN6-223ENST00000637823 CEP68Q76N32 757 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 YTHDF3Q7Z739 585 aaKnown RBP11.38□□□□□ -0.59
CLN6-223ENST00000637823 TRIM48Q8IWZ4 208 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 C2orf73Q8N5S3 287 aaPredicted RBP11.38□□□□□ -0.59
CLN6-223ENST00000637823 DCBLD1Q8N8Z6 715 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 FAM46DQ8NEK8 389 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 NEIL2Q969S2 332 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 WDR34Q96EX3 536 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 PTCD3Q96EY7 689 aaKnown RBP11.38□□□□□ -0.59
CLN6-223ENST00000637823 C3orf30Q96M34 536 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 SAR1AQ9NR31 198 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 RIC8BQ9NVN3 520 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 PILRBQ9UKJ0 227 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 ICKQ9UPZ9 632 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 BTRCQ9Y297 605 aa11.38□□□□□ -0.59
CLN6-223ENST00000637823 PRAMEF33A0A0G2JMD5 474 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 A0A1B0GVT2 93 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 E7EQ34 232 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 E9PBE3 544 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 H0YIV9 168 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 SLC28A1O00337 649 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 DLL1O00548 723 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 FFAR3O14843 346 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 GPR42O15529 346 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 AQP9O43315 295 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 KLHL41O60662 606 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 PRAMEF4O60810 478 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 GPR37L1O60883 481 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 KIAA0754O94854 1291 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 CELA2BP08218 269 aaPredicted RBP11.37□□□□□ -0.59
CLN6-223ENST00000637823 SP9P0CG40 484 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 DPP6P42658 865 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 CTSKP43235 329 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 UBE2IP63279 158 aaKnown RBP11.37□□□□□ -0.59
CLN6-223ENST00000637823 IRX1P78414 480 aaPredicted RBP11.37□□□□□ -0.59
CLN6-223ENST00000637823 ABRAXAS2Q15018 415 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 ZRSR2Q15696 482 aaKnown RBP11.37□□□□□ -0.59
CLN6-223ENST00000637823 CPSF6Q16630 551 aaKnown RBP eCLIP11.37□□□□□ -0.59
CLN6-223ENST00000637823 HIST2H2ACQ16777 129 aaPredicted RBP11.37□□□□□ -0.59
CLN6-223ENST00000637823 GALNTL6Q49A17 601 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 XKR7Q5GH72 579 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 PRAMEF9Q5VWM5 478 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 FAM91A1Q658Y4 838 aa11.37□□□□□ -0.59
CLN6-223ENST00000637823 HIST2H2AA3Q6FI13 130 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms