RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 SZRD1Q7Z422 152 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 HAUS6Q7Z4H7 955 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 GALNT5Q7Z7M9 940 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF554Q86TJ5 538 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 TRPT1Q86TN4 253 aaKnown RBP1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 AACSQ86V21 672 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 COMMD2Q86X83 199 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 GALNT13Q8IUC8 556 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 CEP97Q8IW35 865 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 CRYBG2Q8N1P7 616 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 ANKRD36BQ8N2N9 1353 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 GCSAMQ8N6F7 178 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 POC5Q8NA72 575 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 PPFIBP2Q8ND30 876 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF473Q8WTR7 871 aaKnown RBP1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 TMEM131Q92545 1883 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 ARHGAP45Q92619 1136 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 PTERQ96BW5 349 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 FAM120BQ96EK7 910 aaKnown RBP1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 SCRN2Q96FV2 425 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 THOC1Q96FV9 657 aaKnown RBP1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 PGAM5Q96HS1 289 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 MAGED4Q96JG8 741 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 CCDC7Q96M83 1385 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 CEP295NLQ96MC4 621 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF582Q96NG8 517 aaPredicted RBP1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 OR2A14Q96R47 310 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 F2RL3Q96RI0 385 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 MYADMQ96S97 322 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 CDRT15Q96T59 188 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 URM1Q9BTM9 101 aaKnown RBP1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 KIFC3Q9BVG8 833 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 RTN4RQ9BZR6 473 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF541Q9H0D2 1346 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 S1PR5Q9H228 398 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 TRIOBPQ9H2D6 2365 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 MUC13Q9H3R2 512 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 OSGEPL1Q9H4B0 414 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 MAGIXQ9H6Y5 334 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 TBC1D17Q9HA65 648 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 CENPJQ9HC77 1338 aaPredicted RBP1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 ZBTB20Q9HC78 741 aaPredicted RBP1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 LTB4R2Q9NPC1 389 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 SLC52A3Q9NQ40 469 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 PPANQ9NQ55 473 aaKnown RBP1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 STK36Q9NRP7 1315 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 BLOC1S4Q9NUP1 217 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 NPAP1Q9NZP6 1156 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 RCC2Q9P258 522 aaKnown RBP1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 CPSF2Q9P2I0 782 aaKnown RBP1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 LARSQ9P2J5 1176 aaKnown RBP1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 ADAMTS9Q9P2N4 1935 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 TSPYL4Q9UJ04 414 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 RPS6KA6Q9UK32 745 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 ZHX1Q9UKY1 873 aaPredicted RBP1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 PPIEQ9UNP9 301 aaKnown RBP1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 KCNJ14Q9UNX9 436 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 TMEM5Q9Y2B1 443 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 RABGAP1Q9Y3P9 1069 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 RIPK3Q9Y572 518 aa1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 SEC23IPQ9Y6Y8 1000 aaKnown RBP1.02□□□□□ -2.25
SMARCB1-209ENST00000635578 CEP290O15078 2479 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 TET1Q8NFU7 2136 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 FANCMQ8IYD8 2048 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 DOCK6Q96HP0 2047 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 DENND4CQ5VZ89 1909 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 MTCL1Q9Y4B5 1905 aaKnown RBP1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 TSC2P49815 1807 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 COL1A1P02452 1464 aaPredicted RBP1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 BCL9O00512 1426 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 RTL1A6NKG5 1358 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 USP47Q96K76 1375 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 MAP3K5Q99683 1374 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 PLEKHG2Q9H7P9 1386 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 MAP3K19Q56UN5 1328 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 PRSS51A0A1B0GVH4 220 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 A0A1W2PPI3 338 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 A0A1W2PRB8 838 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 HYKKA2RU49 373 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 ANKRD61A6NGH8 418 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 KRTAP16-1A8MUX0 517 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 MAGEB17A8MXT2 336 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 BLOC1S5-TXNDC5H3BN57 136 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 DNM1LO00429 736 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 PSMD14O00487 310 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF197O14709 1029 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 XRCC3O43542 346 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 DIAPH2O60879 1101 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 MITFO75030 526 aaPredicted RBP1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 PTP4A3O75365 173 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 AVILO75366 819 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 GFPT2O94808 682 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 OR2C1O95371 312 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 GCNT3O95395 438 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 STARD3NLO95772 234 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 TUBBP07437 444 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 CD48P09326 243 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 PLA2G4BP0C869 781 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 CSH1P0DML2 217 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 CSH2P0DML3 217 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms