RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 TEX9Q8N6V9 391 aa14□□□□□ -0.17
LINC00339-208ENST00000634934 LMNTD1Q8N9Z9 388 aa14□□□□□ -0.17
LINC00339-208ENST00000634934 OR4E2Q8NGC2 313 aa14□□□□□ -0.17
LINC00339-208ENST00000634934 PHF21BQ96EK2 531 aa14□□□□□ -0.17
LINC00339-208ENST00000634934 LDHAL6BQ9BYZ2 381 aaPredicted RBP14□□□□□ -0.17
LINC00339-208ENST00000634934 SRMSQ9H3Y6 488 aa14□□□□□ -0.17
LINC00339-208ENST00000634934 KCNK4Q9NYG8 393 aa14□□□□□ -0.17
LINC00339-208ENST00000634934 WWOXQ9NZC7 414 aa14□□□□□ -0.17
LINC00339-208ENST00000634934 NCKIPSDQ9NZQ3 722 aa14□□□□□ -0.17
LINC00339-208ENST00000634934 ZFP69BQ9UJL9 534 aa14□□□□□ -0.17
LINC00339-208ENST00000634934 MID2Q9UJV3 735 aa14□□□□□ -0.17
LINC00339-208ENST00000634934 TARM1B6A8C7 271 aa13.99□□□□□ -0.17
LINC00339-208ENST00000634934 NUDT21O43809 227 aaKnown RBP13.99□□□□□ -0.17
LINC00339-208ENST00000634934 LDOC1O95751 146 aaPredicted RBP13.99□□□□□ -0.17
LINC00339-208ENST00000634934 MTHFD2P13995 350 aa13.99□□□□□ -0.17
LINC00339-208ENST00000634934 GLB1P16278 677 aa13.99□□□□□ -0.17
LINC00339-208ENST00000634934 ATP5F1P24539 256 aaPredicted RBP13.99□□□□□ -0.17
LINC00339-208ENST00000634934 RAB28P51157 221 aa13.99□□□□□ -0.17
LINC00339-208ENST00000634934 C18orf21Q32NC0 220 aaPredicted RBP13.99□□□□□ -0.17
LINC00339-208ENST00000634934 FBXO48Q5FWF7 155 aa13.99□□□□□ -0.17
LINC00339-208ENST00000634934 SULT1C3Q6IMI6 304 aa13.99□□□□□ -0.17
LINC00339-208ENST00000634934 AGTRAPQ6RW13 159 aa13.99□□□□□ -0.17
LINC00339-208ENST00000634934 ZYG11AQ6WRX3 759 aa13.99□□□□□ -0.17
LINC00339-208ENST00000634934 AMIGO1Q86WK6 493 aa13.99□□□□□ -0.17
LINC00339-208ENST00000634934 NAXDQ8IW45 347 aa13.99□□□□□ -0.17
LINC00339-208ENST00000634934 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.99□□□□□ -0.17
LINC00339-208ENST00000634934 PTGR2Q8N8N7 351 aaPredicted RBP13.99□□□□□ -0.17
LINC00339-208ENST00000634934 Q8N9G6 341 aaPredicted RBP13.99□□□□□ -0.17
LINC00339-208ENST00000634934 PPFIBP2Q8ND30 876 aa13.99□□□□□ -0.17
LINC00339-208ENST00000634934 FAM13CQ8NE31 585 aa13.99□□□□□ -0.17
LINC00339-208ENST00000634934 RDH11Q8TC12 318 aa13.99□□□□□ -0.17
LINC00339-208ENST00000634934 ATL1Q8WXF7 558 aa13.99□□□□□ -0.17
LINC00339-208ENST00000634934 N4BP2L2Q92802 583 aaPredicted RBP13.99□□□□□ -0.17
LINC00339-208ENST00000634934 RHBDF1Q96CC6 855 aa13.99□□□□□ -0.17
LINC00339-208ENST00000634934 FBXL8Q96CD0 374 aa13.99□□□□□ -0.17
LINC00339-208ENST00000634934 PTCD3Q96EY7 689 aaKnown RBP13.99□□□□□ -0.17
LINC00339-208ENST00000634934 CNDP2Q96KP4 475 aaKnown RBP13.99□□□□□ -0.17
LINC00339-208ENST00000634934 TBC1D10AQ9BXI6 508 aa13.99□□□□□ -0.17
LINC00339-208ENST00000634934 ATG10Q9H0Y0 220 aa13.99□□□□□ -0.17
LINC00339-208ENST00000634934 DCLRE1BQ9H816 532 aa13.99□□□□□ -0.17
LINC00339-208ENST00000634934 SPATA7Q9P0W8 599 aa13.99□□□□□ -0.17
LINC00339-208ENST00000634934 STOX2Q9P2F5 926 aaPredicted RBP13.99□□□□□ -0.17
LINC00339-208ENST00000634934 ICKQ9UPZ9 632 aa13.99□□□□□ -0.17
LINC00339-208ENST00000634934 ARID1BQ8NFD5 2236 aaPredicted RBP13.98□□□□□ -0.17
LINC00339-208ENST00000634934 GOLGA4Q13439 2230 aaKnown RBP13.98□□□□□ -0.17
LINC00339-208ENST00000634934 LY6G6EA0A0G2JKS1 128 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 DCDC2BA2VCK2 349 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 A8MT66 165 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 G3V2L1 256 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 SLC30A4O14863 429 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 DLX3O60479 287 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 PEX11AO75192 247 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 KCNA4P22459 653 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 IMPA1P29218 277 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 ALDH4A1P30038 563 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 PKLRP30613 574 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 SHMT2P34897 504 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 HSD17B2P37059 387 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 HNMTP50135 292 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 PNLIPRP1P54315 467 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 PROX2Q3B8N5 592 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 CDKL4Q5MAI5 379 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 ANKS6Q68DC2 871 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 GUSBP11Q6P575 273 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 TCAIMQ8N3R3 496 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 KIF2BQ8N4N8 673 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 PDPRQ8NCN5 879 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 OR6C4Q8NGE1 309 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 ZNF480Q8WV37 535 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 CCDC74AQ96AQ1 378 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 MED8Q96G25 268 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 RAB11FIP5Q9BXF6 653 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 UCK1Q9HA47 277 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 EVA1BQ9NVM1 165 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 COPG2Q9UBF2 871 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 FTSJ1Q9UET6 329 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 TMCO1Q9UM00 188 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 U3KQA8 63 aa13.98□□□□□ -0.17
LINC00339-208ENST00000634934 WDR91A4D1P6 747 aa13.97□□□□□ -0.17
LINC00339-208ENST00000634934 OR6C74A6NCV1 312 aa13.97□□□□□ -0.17
LINC00339-208ENST00000634934 ZNF839A8K0R7 811 aa13.97□□□□□ -0.17
LINC00339-208ENST00000634934 TM4SF5O14894 197 aa13.97□□□□□ -0.17
LINC00339-208ENST00000634934 CKMT1AP12532 417 aa13.97□□□□□ -0.17
LINC00339-208ENST00000634934 TYRP1P17643 537 aa13.97□□□□□ -0.17
LINC00339-208ENST00000634934 AMD1P17707 334 aa13.97□□□□□ -0.17
LINC00339-208ENST00000634934 SERPINB4P48594 390 aa13.97□□□□□ -0.17
LINC00339-208ENST00000634934 HSPA7P48741 367 aa13.97□□□□□ -0.17
LINC00339-208ENST00000634934 AGTR2P50052 363 aa13.97□□□□□ -0.17
LINC00339-208ENST00000634934 DUSP3P51452 185 aaPredicted RBP13.97□□□□□ -0.17
LINC00339-208ENST00000634934 ALDH18A1P54886 795 aaKnown RBP13.97□□□□□ -0.17
LINC00339-208ENST00000634934 OR1D5P58170 312 aa13.97□□□□□ -0.17
LINC00339-208ENST00000634934 NAE1Q13564 534 aa13.97□□□□□ -0.17
LINC00339-208ENST00000634934 FASTKQ14296 549 aaKnown RBP13.97□□□□□ -0.17
LINC00339-208ENST00000634934 ARHGAP19Q14CB8 494 aa13.97□□□□□ -0.17
LINC00339-208ENST00000634934 CYP2A13Q16696 494 aa13.97□□□□□ -0.17
LINC00339-208ENST00000634934 ATG16L1Q676U5 607 aa13.97□□□□□ -0.17
LINC00339-208ENST00000634934 EFL1Q7Z2Z2 1120 aaKnown RBP13.97□□□□□ -0.17
LINC00339-208ENST00000634934 RAB44Q7Z6P3 723 aaPredicted RBP13.97□□□□□ -0.17
LINC00339-208ENST00000634934 C10orf107Q8IVU9 208 aa13.97□□□□□ -0.17
LINC00339-208ENST00000634934 OR2L8Q8NGY9 312 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms