RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 RNASEH2BQ5TBB1 312 aaKnown RBP3.08□□□□□ -1.92
VPS8-228ENST00000628962 FRG2Q64ET8 278 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 DUS1LQ6P1R4 473 aaKnown RBP3.08□□□□□ -1.92
VPS8-228ENST00000628962 C8orf82Q6P1X6 216 aaPredicted RBP3.08□□□□□ -1.92
VPS8-228ENST00000628962 CASC4Q6P4E1 433 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 FIGLAQ6QHK4 219 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 SLC36A4Q6YBV0 504 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 B3GNT6Q6ZMB0 384 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 C15orf39Q6ZRI6 1047 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 KCTD9Q7L273 389 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 SLC9B2Q86UD5 537 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 C4orf19Q8IY42 314 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 EMC1Q8N766 993 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 ANKRD20A12PQ8NF67 263 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 TMEM163Q8TC26 289 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 ZFAND2BQ8WV99 257 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 HEXDCQ8WVB3 486 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 SEPT1Q8WYJ6 367 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 TRIB2Q92519 343 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 ST6GALNAC6Q969X2 333 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 SLAMF9Q96A28 289 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 OTUB1Q96FW1 271 aaPredicted RBP3.08□□□□□ -1.92
VPS8-228ENST00000628962 BSCL2Q96G97 398 aaPredicted RBP3.08□□□□□ -1.92
VPS8-228ENST00000628962 SFXN2Q96NB2 322 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 MUS81Q96NY9 551 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 LRRC3BQ96PB8 259 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 PRAM1Q96QH2 718 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 HNRNPABQ99729 332 aaKnown RBP3.08□□□□□ -1.92
VPS8-228ENST00000628962 WDR77Q9BQA1 342 aaPredicted RBP3.08□□□□□ -1.92
VPS8-228ENST00000628962 HAUS8Q9BT25 410 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 SPXQ9BT56 116 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 FNDC11Q9BVV2 318 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 POLDIP3Q9BY77 421 aaKnown RBP3.08□□□□□ -1.92
VPS8-228ENST00000628962 ABCG8Q9H221 673 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 FN3KQ9H479 309 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 VPS18Q9P253 973 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 CHKBQ9Y259 395 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 ACEP12821 1306 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 ZNF541Q9H0D2 1346 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 RRBP1Q9P2E9 1410 aaKnown RBP3.08□□□□□ -1.92
VPS8-228ENST00000628962 DUOX2Q9NRD8 1548 aa3.08□□□□□ -1.92
VPS8-228ENST00000628962 COL24A1Q17RW2 1714 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 SYCE3A1L190 88 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 I6L893 689 aaPredicted RBP3.07□□□□□ -1.92
VPS8-228ENST00000628962 J3QR06 171 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 ST8SIA3O43173 380 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 XRCC3O43542 346 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 ZIC3O60481 467 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 ZNF217O75362 1048 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 SEC22BO75396 215 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 CRCPO75575 148 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 LDLRP01130 860 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 RAB40ALP0C0E4 278 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 GM2AP17900 193 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 CYP11B2P19099 503 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 ACAT1P24752 427 aaKnown RBP3.07□□□□□ -1.92
VPS8-228ENST00000628962 HRH2P25021 359 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 HNRNPH1P31943 449 aaKnown RBP3.07□□□□□ -1.92
VPS8-228ENST00000628962 CTNNB1P35222 781 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 WNT5AP41221 380 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 CD86P42081 329 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 KHKP50053 298 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 ASCL1P50553 236 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 SLC12A3P55017 1021 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 YBEYP58557 167 aaPredicted RBP3.07□□□□□ -1.92
VPS8-228ENST00000628962 TAS2R38P59533 333 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 HNRNPKP61978 463 aaKnown RBP eCLIP3.07□□□□□ -1.92
VPS8-228ENST00000628962 TRAF2Q12933 501 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 PLA2G7Q13093 441 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 FUT11Q495W5 492 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 TDRD12Q587J7 1177 aaKnown RBP3.07□□□□□ -1.92
VPS8-228ENST00000628962 PPP6R3Q5H9R7 873 aaPredicted RBP3.07□□□□□ -1.92
VPS8-228ENST00000628962 LRRC73Q5JTD7 316 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 KCNT1Q5JUK3 1230 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 DCAF12L2Q5VW00 463 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 WDR73Q6P4I2 378 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 FAM198BQ6UWH4 519 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 ENPP7Q6UWV6 458 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 TMEM182Q6ZP80 229 aaPredicted RBP3.07□□□□□ -1.92
VPS8-228ENST00000628962 MON1BQ7L1V2 547 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 GPR180Q86V85 440 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 FAM219AQ8IW50 185 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 PM20D2Q8IYS1 436 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 BEST3Q8N1M1 668 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 PCDH20Q8N6Y1 951 aaKnown RBP3.07□□□□□ -1.92
VPS8-228ENST00000628962 ZNF611Q8N823 705 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 MIGA1Q8NAN2 632 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 UXS1Q8NBZ7 420 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 LPCAT1Q8NF37 534 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 OR2AJ1Q8NGZ0 328 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 LILRB1Q8NHL6 650 aaPredicted RBP3.07□□□□□ -1.92
VPS8-228ENST00000628962 BBS10Q8TAM1 723 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 ST7LQ8TDW4 575 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 PPP4R1Q8TF05 950 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 DNAAF4Q8WXU2 420 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 TAF4BQ92750 862 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 TAAR8Q969N4 342 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 STAMBPL1Q96FJ0 436 aa3.07□□□□□ -1.92
VPS8-228ENST00000628962 PRMT6Q96LA8 375 aaPredicted RBP3.07□□□□□ -1.92
VPS8-228ENST00000628962 OR6C1Q96RD1 312 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms