RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 POPDC3Q9HBV1 291 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 TM7SF3Q9NS93 570 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 FBXO4Q9UKT5 387 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 TRAF6Q9Y4K3 522 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 TECTAO75443 2155 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 CCDC189A1A4V9 331 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 TSPAN11A1L157 253 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 A8MU76 341 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 UBFD1O14562 309 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 HNF4AP41235 474 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 CCT8P50990 548 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 MRPS35P82673 323 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 KLC1Q07866 573 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 FASTKQ14296 549 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 SFT2D3Q587I9 215 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 ZFP1Q6P2D0 407 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 USP53Q70EK8 1073 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 MILR1Q7Z6M3 343 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 DHDDSQ86SQ9 333 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 C17orf64Q86WR6 236 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 EID2Q8N6I1 236 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 TFB2MQ9H5Q4 396 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 CALRP27797 417 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 MPLP40238 635 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 PIK3CGP48736 1102 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 TCHHL1Q5QJ38 904 aaPredicted RBP12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 PLEKHS1Q5SXH7 462 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 IL27RAQ6UWB1 636 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 TRPC4APQ8TEL6 797 aa12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 OAS3Q9Y6K5 1087 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-207ENST00000628646 ARHGAP10A1A4S6 786 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 PSMD12O00232 456 aaPredicted RBP12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 AQP9O43315 295 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 LBPP18428 481 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 IL10P22301 178 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 ME2P23368 584 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 EEF1DP29692 281 aaKnown RBP12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 XIAPP98170 497 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 DUS1LQ6P1R4 473 aaKnown RBP12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 CUZD1Q86UP6 607 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 FAM174AQ8TBP5 190 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 KLHL25Q9H0H3 589 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 CCDC177Q9NQR7 707 aaPredicted RBP12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 HCN2Q9UL51 889 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 PLEKHM1Q9Y4G2 1056 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 COPG1Q9Y678 874 aaKnown RBP12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 OR5K4A6NMS3 321 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 STK16O75716 305 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 MYO1DO94832 1006 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 CASP2P42575 452 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 SH3BGRP55822 239 aaPredicted RBP12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 HHEXQ03014 270 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 DPTQ07507 201 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 IZUMO2Q6UXV1 221 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 RPS27LQ71UM5 84 aaKnown RBP12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 DCBLD1Q8N8Z6 715 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 GPR150Q8NGU9 434 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 METTL6Q8TCB7 284 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 PRRX2Q99811 253 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 H7C0S8 307 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 IRX1P78414 480 aaPredicted RBP12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 SPEM2Q0P670 501 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 XKR6Q5GH73 641 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 ZNF549Q6P9A3 640 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 TMPRSS11BQ86T26 416 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 DSELQ8IZU8 1212 aa12.1□□□□□ -0.47
SYNGAP1-207ENST00000628646 A8MT66 165 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 AZIN1O14977 448 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 ZNF37AP17032 561 aaPredicted RBP12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 MS4A2Q01362 244 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 CEACAM7Q14002 265 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 LRP8Q14114 963 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 HERC3Q15034 1050 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 PHF19Q5T6S3 580 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 CAPRIN2Q6IMN6 1127 aaKnown RBP12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 TICAM1Q8IUC6 712 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 DCUN1D3Q8IWE4 304 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 TMEM145Q8NBT3 493 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 PARVBQ9HBI1 364 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 USP36Q9P275 1121 aaKnown RBP12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 POLG2Q9UHN1 485 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 CROTQ9UKG9 612 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 FFAR3O14843 346 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 GPR42O15529 346 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 POLR2CP19387 275 aaPredicted RBP12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 DUSP3P51452 185 aaPredicted RBP12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 CPSF6Q16630 551 aaKnown RBP eCLIP12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 CDKN3Q16667 212 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 PLK5Q496M5 336 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 LPCAT4Q643R3 524 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 CWF19L1Q69YN2 538 aaKnown RBP12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 AVL9Q8NBF6 648 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 DLG3Q92796 817 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 EID2BQ96D98 161 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 MTFMTQ96DP5 389 aaKnown RBP12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 CCT7Q99832 543 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 PCED1AQ9H1Q7 454 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 GSTO2Q9H4Y5 243 aa12.09□□□□□ -0.47
SYNGAP1-207ENST00000628646 TAAR2Q9P1P5 351 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms