RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 GLRBP48167 497 aa18.43■□□□□ 0.54
SQSTM1-216ENST00000626660 HSD11B2P80365 405 aa18.43■□□□□ 0.54
SQSTM1-216ENST00000626660 NAE1Q13564 534 aa18.43■□□□□ 0.54
SQSTM1-216ENST00000626660 NAA25Q14CX7 972 aa18.43■□□□□ 0.54
SQSTM1-216ENST00000626660 CDKL4Q5MAI5 379 aa18.43■□□□□ 0.54
SQSTM1-216ENST00000626660 CAPN13Q6MZZ7 669 aaPredicted RBP18.43■□□□□ 0.54
SQSTM1-216ENST00000626660 ISCA2Q86U28 154 aa18.43■□□□□ 0.54
SQSTM1-216ENST00000626660 TCAIMQ8N3R3 496 aa18.43■□□□□ 0.54
SQSTM1-216ENST00000626660 FLVCR1-AS1Q8TAF5 88 aa18.43■□□□□ 0.54
SQSTM1-216ENST00000626660 RHEBL1Q8TAI7 183 aa18.43■□□□□ 0.54
SQSTM1-216ENST00000626660 ALKBH8Q96BT7 664 aaKnown RBP18.43■□□□□ 0.54
SQSTM1-216ENST00000626660 NXPE2Q96DL1 559 aa18.43■□□□□ 0.54
SQSTM1-216ENST00000626660 SLC41A2Q96JW4 573 aa18.43■□□□□ 0.54
SQSTM1-216ENST00000626660 SCYL1Q96KG9 808 aa18.43■□□□□ 0.54
SQSTM1-216ENST00000626660 MIPEPQ99797 713 aa18.43■□□□□ 0.54
SQSTM1-216ENST00000626660 TMEM109Q9BVC6 243 aa18.43■□□□□ 0.54
SQSTM1-216ENST00000626660 ACAT2Q9BWD1 397 aa18.43■□□□□ 0.54
SQSTM1-216ENST00000626660 PCBD2Q9H0N5 130 aa18.43■□□□□ 0.54
SQSTM1-216ENST00000626660 ATG10Q9H0Y0 220 aa18.43■□□□□ 0.54
SQSTM1-216ENST00000626660 PISDQ9UG56 409 aa18.43■□□□□ 0.54
SQSTM1-216ENST00000626660 NCF1BA6NI72 391 aaPredicted RBP18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 NCF1CA8MVU1 366 aaPredicted RBP18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 SUPT3HB4E1H0 165 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 SUPT3HO75486 399 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 RBP1P09455 135 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 PYGBP11216 843 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 NCF1P14598 390 aaPredicted RBP18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 PVRP15151 417 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 ST6GAL1P15907 406 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 PSMB5P28074 263 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 MLLT3P42568 568 aaPredicted RBP18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 LSSP48449 732 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 TBPL1P62380 186 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 GABREP78334 506 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 CAMK2BQ13554 666 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 KRT71Q3SY84 523 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 BEND6Q5SZJ8 279 aaPredicted RBP18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 PRAMEF13Q5VWM6 474 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 CYB5D1Q6P9G0 228 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 CROCCP2Q86T23 111 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 LCA5Q86VQ0 697 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 LRRC56Q8IYG6 542 aaPredicted RBP18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 C19orf47Q8N9M1 422 aaKnown RBP18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 OR2A1Q8NGT9 310 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 MZB1Q8WU39 189 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 TRAPPC9Q96Q05 1148 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 PDE7BQ9NP56 450 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 EURLQ9NYK6 297 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 WWOXQ9NZC7 414 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 NUDT4Q9NZJ9 180 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 TAC3Q9UHF0 121 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 LGALS13Q9UHV8 139 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 PCDHGA8Q9Y5G5 932 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 AK5Q9Y6K8 562 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 HEATR5BQ9P2D3 2071 aa18.42■□□□□ 0.54
SQSTM1-216ENST00000626660 TRABD2BA6NFA1 517 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 B4E171 279 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 GOLGA8RI6L899 631 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 HGFP14210 728 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 RBMS1P29558 406 aaKnown RBP18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 TSPAN7P41732 249 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 MAPK10P53779 464 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 ABATP80404 500 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 ICE2Q659A1 982 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 SULT1C3Q6IMI6 304 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 CLEC14AQ86T13 490 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 LSMEM2Q8N112 164 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 CYP4X1Q8N118 509 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 PLD6Q8N2A8 252 aaKnown RBP18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 D2HGDHQ8N465 521 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 OR2L3Q8NG85 312 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 OR56A3Q8NH54 315 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 RHBDF1Q96CC6 855 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 TCTN2Q96GX1 697 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 GPR78Q96P69 363 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 ATOH8Q96SQ7 321 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 KLHL25Q9H0H3 589 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 CNOT10Q9H9A5 744 aaKnown RBP18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 MRPS30Q9NP92 439 aaKnown RBP18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 OCIAD1Q9NX40 245 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 BTRCQ9Y297 605 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 SPEGQ15772 3267 aa18.41■□□□□ 0.54
SQSTM1-216ENST00000626660 A0A1W2PPM1 405 aa18.4■□□□□ 0.54
SQSTM1-216ENST00000626660 GSTA1P08263 222 aa18.4■□□□□ 0.54
SQSTM1-216ENST00000626660 CCL4P13236 92 aa18.4■□□□□ 0.54
SQSTM1-216ENST00000626660 MAGP20916 626 aa18.4■□□□□ 0.54
SQSTM1-216ENST00000626660 MC2RQ01718 297 aa18.4■□□□□ 0.54
SQSTM1-216ENST00000626660 ACY1Q03154 408 aa18.4■□□□□ 0.54
SQSTM1-216ENST00000626660 PRDX1Q06830 199 aaKnown RBP18.4■□□□□ 0.54
SQSTM1-216ENST00000626660 FOXM1Q08050 763 aa18.4■□□□□ 0.54
SQSTM1-216ENST00000626660 ZNF844Q08AG5 666 aa18.4■□□□□ 0.54
SQSTM1-216ENST00000626660 RTP5Q14D33 572 aa18.4■□□□□ 0.54
SQSTM1-216ENST00000626660 TECRLQ5HYJ1 363 aa18.4■□□□□ 0.54
SQSTM1-216ENST00000626660 KIAA1614Q5VZ46 1190 aa18.4■□□□□ 0.54
SQSTM1-216ENST00000626660 FIGLAQ6QHK4 219 aa18.4■□□□□ 0.54
SQSTM1-216ENST00000626660 LCTLQ6UWM7 567 aa18.4■□□□□ 0.54
SQSTM1-216ENST00000626660 LRIG3Q6UXM1 1119 aa18.4■□□□□ 0.54
SQSTM1-216ENST00000626660 FAM20CQ8IXL6 584 aa18.4■□□□□ 0.54
SQSTM1-216ENST00000626660 IQCKQ8N0W5 287 aa18.4■□□□□ 0.54
SQSTM1-216ENST00000626660 PDPRQ8NCN5 879 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms