RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 TEX9Q8N6V9 391 aa16.04■□□□□ 0.16
CCNA1-203ENST00000625767 ATL1Q8WXF7 558 aa16.04■□□□□ 0.16
CCNA1-203ENST00000625767 L3HYPDHQ96EM0 354 aa16.04■□□□□ 0.16
CCNA1-203ENST00000625767 CCDC3Q9BQI4 270 aa16.04■□□□□ 0.16
CCNA1-203ENST00000625767 SHCBP1LQ9BZQ2 653 aa16.04■□□□□ 0.16
CCNA1-203ENST00000625767 C20orf27Q9GZN8 174 aa16.04■□□□□ 0.16
CCNA1-203ENST00000625767 TWSG1Q9GZX9 223 aa16.04■□□□□ 0.16
CCNA1-203ENST00000625767 UCK1Q9HA47 277 aa16.04■□□□□ 0.16
CCNA1-203ENST00000625767 CCDC177Q9NQR7 707 aaPredicted RBP16.04■□□□□ 0.16
CCNA1-203ENST00000625767 TMEM9Q9P0T7 183 aa16.04■□□□□ 0.16
CCNA1-203ENST00000625767 FTSJ1Q9UET6 329 aa16.04■□□□□ 0.16
CCNA1-203ENST00000625767 MID2Q9UJV3 735 aa16.04■□□□□ 0.16
CCNA1-203ENST00000625767 KLHL20Q9Y2M5 609 aa16.04■□□□□ 0.16
CCNA1-203ENST00000625767 MDC1Q14676 2089 aaKnown RBP16.03■□□□□ 0.16
CCNA1-203ENST00000625767 GSAPA4D1B5 854 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 OR5K3A6NET4 321 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 ISM1B1AKI9 464 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 POLR3GO15318 223 aaPredicted RBP16.03■□□□□ 0.16
CCNA1-203ENST00000625767 GFRA3O60609 400 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 LYPLA1O75608 230 aaPredicted RBP16.03■□□□□ 0.16
CCNA1-203ENST00000625767 PROS1P07225 676 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 CHRNGP07510 517 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 NPPBP16860 134 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 PRDX3P30048 256 aaKnown RBP16.03■□□□□ 0.16
CCNA1-203ENST00000625767 CSF2RBP32927 897 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 LSSP48449 732 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 PPM1FP49593 454 aaPredicted RBP16.03■□□□□ 0.16
CCNA1-203ENST00000625767 GFERP55789 205 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 DNAJB13P59910 316 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 THEMIS2Q5TEJ8 643 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 USP53Q70EK8 1073 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 GOLGA7Q7Z5G4 137 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 TCAIMQ8N3R3 496 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 OR2A1Q8NGT9 310 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 OR6Y1Q8NGX8 325 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 HMGCLL1Q8TB92 370 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 SH3KBP1Q96B97 665 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 MIPEPQ99797 713 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.03■□□□□ 0.16
CCNA1-203ENST00000625767 TNFRSF12AQ9NP84 129 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 SEMA4BQ9NPR2 832 aaPredicted RBP16.03■□□□□ 0.16
CCNA1-203ENST00000625767 EVA1BQ9NVM1 165 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 CUEDC1Q9NWM3 386 aaPredicted RBP16.03■□□□□ 0.16
CCNA1-203ENST00000625767 OR6C2Q9NZP2 312 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 OPTCQ9UBM4 332 aa16.03■□□□□ 0.16
CCNA1-203ENST00000625767 ATXN7L1Q9ULK2 861 aaPredicted RBP16.03■□□□□ 0.16
CCNA1-203ENST00000625767 CNOT1A5YKK6 2376 aaKnown RBP16.03■□□□□ 0.16
CCNA1-203ENST00000625767 A0A1W2PQM1 296 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 PIPSLA2A3N6 862 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 K7EPI3 171 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 UBFD1O14562 309 aaKnown RBP16.02■□□□□ 0.16
CCNA1-203ENST00000625767 BIRC5O15392 142 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 ITM2AO43736 263 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 AMD1P17707 334 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 MPSTP25325 297 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 CD1CP29017 333 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 CAPZBP47756 277 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 CCL7P80098 99 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 GTF2H2Q13888 395 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 INAVAQ3KP66 663 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 PRAMEF13Q5VWM6 474 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 CAPN13Q6MZZ7 669 aaPredicted RBP16.02■□□□□ 0.16
CCNA1-203ENST00000625767 GTF2H2CQ6P1K8 395 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 PIP4P1Q86T03 277 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 KLHDC8AQ8IYD2 350 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 RAB42Q8N4Z0 105 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 SNX31Q8N9S9 440 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 AVL9Q8NBF6 648 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 OR52B6Q8NGF0 335 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 TRPC4APQ8TEL6 797 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 ZNF483Q8TF39 744 aaPredicted RBP16.02■□□□□ 0.16
CCNA1-203ENST00000625767 SMPDL3AQ92484 453 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 NCSTNQ92542 709 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 NEIL2Q969S2 332 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 CCDC126Q96EE4 140 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 CDK15Q96Q40 435 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 OR2A14Q96R47 310 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 NUDT22Q9BRQ3 303 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 RAB11FIP5Q9BXF6 653 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 C1QTNF3Q9BXJ4 246 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 KLHL25Q9H0H3 589 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 SLC32A1Q9H598 525 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 ACTR10Q9NZ32 417 aa16.02■□□□□ 0.16
CCNA1-203ENST00000625767 IGKV1-8A0A0C4DH67 115 aa16.02■□□□□ 0.15
CCNA1-203ENST00000625767 E7EQ34 232 aa16.02■□□□□ 0.15
CCNA1-203ENST00000625767 OR7A17O14581 309 aa16.02■□□□□ 0.15
CCNA1-203ENST00000625767 KIF1CO43896 1103 aaKnown RBP16.02■□□□□ 0.15
CCNA1-203ENST00000625767 PRAMEF10O60809 474 aa16.02■□□□□ 0.15
CCNA1-203ENST00000625767 NEFHP12036 1026 aa16.02■□□□□ 0.15
CCNA1-203ENST00000625767 PVRP15151 417 aa16.02■□□□□ 0.15
CCNA1-203ENST00000625767 UGT2B7P16662 529 aa16.02■□□□□ 0.15
CCNA1-203ENST00000625767 CKMT2P17540 419 aa16.02■□□□□ 0.15
CCNA1-203ENST00000625767 CCDC157Q569K6 752 aa16.02■□□□□ 0.15
CCNA1-203ENST00000625767 CATSPEREQ5SY80 951 aa16.02■□□□□ 0.15
CCNA1-203ENST00000625767 KIAA1614Q5VZ46 1190 aa16.02■□□□□ 0.15
CCNA1-203ENST00000625767 RAB44Q7Z6P3 723 aaPredicted RBP16.02■□□□□ 0.15
CCNA1-203ENST00000625767 OOSP2Q86WS3 158 aa16.02■□□□□ 0.15
CCNA1-203ENST00000625767 LSMEM2Q8N112 164 aa16.02■□□□□ 0.15
CCNA1-203ENST00000625767 DYDC1Q8WWB3 177 aa16.02■□□□□ 0.15
CCNA1-203ENST00000625767 ABCG4Q9H172 646 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms