RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 SYTL3Q4VX76 610 aa10.55□□□□□ -0.72
DDX41-218ENST00000625286 VWA2Q5GFL6 755 aa10.55□□□□□ -0.72
DDX41-218ENST00000625286 B3GNTL1Q67FW5 361 aaPredicted RBP10.55□□□□□ -0.72
DDX41-218ENST00000625286 RPUSD3Q6P087 351 aaKnown RBP10.55□□□□□ -0.72
DDX41-218ENST00000625286 FBXO42Q6P3S6 717 aa10.55□□□□□ -0.72
DDX41-218ENST00000625286 ISLR2Q6UXK2 745 aa10.55□□□□□ -0.72
DDX41-218ENST00000625286 ARHGEF18Q6ZSZ5 1173 aa10.55□□□□□ -0.72
DDX41-218ENST00000625286 SPNS2Q8IVW8 549 aa10.55□□□□□ -0.72
DDX41-218ENST00000625286 PRSS58Q8IYP2 241 aa10.55□□□□□ -0.72
DDX41-218ENST00000625286 RNF214Q8ND24 703 aa10.55□□□□□ -0.72
DDX41-218ENST00000625286 OR1N1Q8NGS0 311 aa10.55□□□□□ -0.72
DDX41-218ENST00000625286 RELTQ969Z4 430 aa10.55□□□□□ -0.72
DDX41-218ENST00000625286 C10orf90Q96M02 699 aa10.55□□□□□ -0.72
DDX41-218ENST00000625286 LMF1Q96S06 567 aa10.55□□□□□ -0.72
DDX41-218ENST00000625286 FERMT1Q9BQL6 677 aa10.55□□□□□ -0.72
DDX41-218ENST00000625286 LUC7LQ9NQ29 371 aaKnown RBP10.55□□□□□ -0.72
DDX41-218ENST00000625286 SEMA3GQ9NS98 782 aa10.55□□□□□ -0.72
DDX41-218ENST00000625286 PACSIN2Q9UNF0 486 aaPredicted RBP10.55□□□□□ -0.72
DDX41-218ENST00000625286 RUVBL2Q9Y230 463 aaKnown RBP10.55□□□□□ -0.72
DDX41-218ENST00000625286 NFS1Q9Y697 457 aa10.55□□□□□ -0.72
DDX41-218ENST00000625286 HYKKA2RU49 373 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 SOWAHDA6NJG2 315 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 PRSS44E7EML9 344 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 QSOX1O00391 747 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 RASGRF2O14827 1237 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 PCDH17O14917 1159 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 S1PR4O95977 384 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 F10P00742 488 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 ZGLP1P0C6A0 271 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 ELAVL4P26378 380 aaKnown RBP10.54□□□□□ -0.72
DDX41-218ENST00000625286 MST1P26927 711 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 PLOD1Q02809 727 aaPredicted RBP10.54□□□□□ -0.72
DDX41-218ENST00000625286 FASTKQ14296 549 aaKnown RBP10.54□□□□□ -0.72
DDX41-218ENST00000625286 GRM7Q14831 915 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 TSTD2Q5T7W7 516 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 MCEMP1Q8IX19 187 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 CCDC170Q8IYT3 715 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 CPAMD8Q8IZJ3 1885 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 OR2A1Q8NGT9 310 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 STT3BQ8TCJ2 826 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 ITLN2Q8WWU7 325 aaPredicted RBP10.54□□□□□ -0.72
DDX41-218ENST00000625286 ZUFSPQ96AP4 578 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 PPP1R2P1Q96PQ5 205 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 MIPEPQ99797 713 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 SELENOSQ9BQE4 189 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 ANP32EQ9BTT0 268 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 CRB3Q9BUF7 120 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 CARD6Q9BX69 1037 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 ETNK1Q9HBU6 452 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 MRM3Q9HC36 420 aaKnown RBP10.54□□□□□ -0.72
DDX41-218ENST00000625286 OLAHQ9NV23 265 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.54□□□□□ -0.72
DDX41-218ENST00000625286 ZC3H7BQ9UGR2 993 aaKnown RBP10.54□□□□□ -0.72
DDX41-218ENST00000625286 KLK4Q9Y5K2 254 aa10.54□□□□□ -0.72
DDX41-218ENST00000625286 SCN2AQ99250 2005 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 IGLV3-12A0A075B6K2 115 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 A0A0J9YVX5 310 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 TARM1B6A8C7 271 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 SUN1O94901 812 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 C1orf105O95561 183 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 HPP00738 406 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 PRR35P0CG20 571 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 PIM1P11309 404 aaPredicted RBP10.53□□□□□ -0.72
DDX41-218ENST00000625286 COX6A1P12074 109 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 ETS1P14921 441 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 BDKRB1P46663 353 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 TNFSF10P50591 281 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 PRTGQ2VWP7 1150 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 ZC3H12BQ5HYM0 836 aaKnown RBP10.53□□□□□ -0.72
DDX41-218ENST00000625286 TCTE1Q5JU00 501 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 YOD1Q5VVQ6 348 aaPredicted RBP10.53□□□□□ -0.72
DDX41-218ENST00000625286 UNC5DQ6UXZ4 953 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 RAD9BQ6WBX8 426 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 DCUN1D3Q8IWE4 304 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 ARHGEF39Q8N4T4 335 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 OR2L3Q8NG85 312 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 OR4L1Q8NH43 312 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 BRIX1Q8TDN6 353 aaKnown RBP10.53□□□□□ -0.72
DDX41-218ENST00000625286 ATG4AQ8WYN0 398 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 SLC22A18Q96BI1 424 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 P2RY12Q9H244 342 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 EPS8L2Q9H6S3 715 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 ZNF304Q9HCX3 659 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 PTGFRNQ9P2B2 879 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 COPG2Q9UBF2 871 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 C3orf18Q9UK00 162 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 NXT1Q9UKK6 140 aaKnown RBP10.53□□□□□ -0.72
DDX41-218ENST00000625286 RIMKLBQ9ULI2 386 aa10.53□□□□□ -0.72
DDX41-218ENST00000625286 EPN1Q9Y6I3 576 aaPredicted RBP10.53□□□□□ -0.72
DDX41-218ENST00000625286 IGKV1-8A0A0C4DH67 115 aa10.52□□□□□ -0.73
DDX41-218ENST00000625286 A0A1B0GUH1 482 aa10.52□□□□□ -0.73
DDX41-218ENST00000625286 A0A1W2PQ72 361 aa10.52□□□□□ -0.73
DDX41-218ENST00000625286 BTNL10A8MVZ5 291 aa10.52□□□□□ -0.73
DDX41-218ENST00000625286 SRPX2O60687 465 aaPredicted RBP10.52□□□□□ -0.73
DDX41-218ENST00000625286 ACPPP15309 386 aa10.52□□□□□ -0.73
DDX41-218ENST00000625286 PER3P56645 1201 aa10.52□□□□□ -0.73
DDX41-218ENST00000625286 CDH17Q12864 832 aa10.52□□□□□ -0.73
DDX41-218ENST00000625286 SPA17Q15506 151 aa10.52□□□□□ -0.73
DDX41-218ENST00000625286 CDSNQ15517 529 aa10.52□□□□□ -0.73
DDX41-218ENST00000625286 KCTD19Q17RG1 926 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms