RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 DNAJC13O75165 2243 aa8.84□□□□□ -0.99
HDAC9-229ENST00000622668 SLC9B1P1A6NJY1 282 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 METTL12A8MUP2 240 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 CTSCP53634 463 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 RPS7P62081 194 aaKnown RBP8.83□□□□□ -1
HDAC9-229ENST00000622668 BST1Q10588 318 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 HLA-BQ31612 363 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 TEDDM1Q5T9Z0 273 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 CLEC6AQ6EIG7 209 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 CLEC4FQ8N1N0 589 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 OR5AR1Q8NGP9 310 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 FIG4Q92562 907 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 CAVIN3Q969G5 261 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 RGMAQ96B86 450 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 CRB3Q9BUF7 120 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 ULBP3Q9BZM4 244 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 RAD21L1Q9H4I0 556 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 TMBIM4Q9HC24 238 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 MARCH4Q9P2E8 410 aaPredicted RBP8.83□□□□□ -1
HDAC9-229ENST00000622668 SARDHQ9UL12 918 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 PTRH2Q9Y3E5 179 aaKnown RBP8.83□□□□□ -1
HDAC9-229ENST00000622668 RFXANKO14593 260 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 MAP2K7O14733 419 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 PLGP00747 810 aaPredicted RBP8.83□□□□□ -1
HDAC9-229ENST00000622668 CBSLP0DN79 551 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 PVRP15151 417 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 ME2P23368 584 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 EPHA3P29320 983 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 CBSP35520 551 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 PPP2CBP62714 309 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 KCNJ2P63252 427 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 PPP2CAP67775 309 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 SF3A2Q15428 464 aaKnown RBP8.83□□□□□ -1
HDAC9-229ENST00000622668 DCAF12Q5T6F0 453 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 CAPRIN2Q6IMN6 1127 aaKnown RBP8.83□□□□□ -1
HDAC9-229ENST00000622668 RFLNAQ6ZTI6 216 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 KDM1BQ8NB78 822 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 PLA2G15Q8NCC3 412 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 ZNF248Q8NDW4 579 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 DENND6BQ8NEG7 585 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 GIMAP7Q8NHV1 300 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 PIWIL2Q8TC59 973 aaKnown RBP8.83□□□□□ -1
HDAC9-229ENST00000622668 HCAR2Q8TDS4 363 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 KIFC1Q9BW19 673 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 MAT2BQ9NZL9 334 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 PCDHGA4Q9Y5G9 962 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.83□□□□□ -1
HDAC9-229ENST00000622668 GBAP04062 536 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 HIST1H2ABP04908 130 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 CD9P21926 228 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 HIST3H2AQ7L7L0 130 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 ARFGAP1Q8N6T3 406 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 SCAIQ8N9R8 606 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 GPR151Q8TDV0 419 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 HIST1H2ACQ93077 130 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 MIEF2Q96C03 454 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 PDXPQ96GD0 296 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 OR52E6Q96RD3 313 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 TBC1D10AQ9BXI6 508 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 HDAC8Q9BY41 377 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 Q9H521 79 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 ZNF358Q9NW07 568 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 PLXNB2O15031 1838 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 CPNE6O95741 557 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 TCN2P20062 427 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 CDKN1CP49918 316 aaPredicted RBP8.83□□□□□ -1
HDAC9-229ENST00000622668 KCNJ11Q14654 390 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 FGD3Q5JSP0 725 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 RANBP10Q6VN20 620 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 MACC1Q6ZN28 852 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 SAMD14Q8IZD0 417 aaPredicted RBP8.83□□□□□ -1
HDAC9-229ENST00000622668 RDH11Q8TC12 318 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 GAB3Q8WWW8 586 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 LPAR4Q99677 370 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 CTRCQ99895 268 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 TMEM120AQ9BXJ8 343 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 REXO4Q9GZR2 422 aaKnown RBP8.83□□□□□ -1
HDAC9-229ENST00000622668 POLR1BQ9H9Y6 1135 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 FGF22Q9HCT0 170 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 TRNAU1APQ9NX07 287 aaKnown RBP8.83□□□□□ -1
HDAC9-229ENST00000622668 GALPQ9UBC7 116 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 PCDHGB3Q9Y5G1 929 aa8.83□□□□□ -1
HDAC9-229ENST00000622668 MRASO14807 208 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 SLC28A2O43868 658 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 LYPLA1O75608 230 aaPredicted RBP8.82□□□□□ -1
HDAC9-229ENST00000622668 KRT75O95678 551 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 HBQ1P09105 142 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 KIR3DL1P43629 444 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 EPHA5P54756 1037 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 GSCP56915 257 aaPredicted RBP8.82□□□□□ -1
HDAC9-229ENST00000622668 TIGD2Q4W5G0 525 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 TMEM92Q6UXU6 159 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 MBOAT1Q6ZNC8 495 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 ZC3HC1Q86WB0 502 aaKnown RBP8.82□□□□□ -1
HDAC9-229ENST00000622668 MAGEB18Q96M61 343 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 CAMK1GQ96NX5 476 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 C12orf65Q9H3J6 166 aaKnown RBP8.82□□□□□ -1
HDAC9-229ENST00000622668 THSD1Q9NS62 852 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 TMEM216Q9P0N5 145 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 SH3BGRL2Q9UJC5 107 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms