RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 URODP06132 367 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 ZNF37AP17032 561 aaPredicted RBP7.73□□□□□ -1.17
VPS11-209ENST00000622309 EEFSECP57772 596 aaKnown RBP7.73□□□□□ -1.17
VPS11-209ENST00000622309 CXCR4P61073 352 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 ORC1Q13415 861 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 TUSC1Q2TAM9 212 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 COL28A1Q2UY09 1125 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 CYP27C1Q4G0S4 372 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 SOWAHCQ53LP3 525 aaPredicted RBP7.73□□□□□ -1.17
VPS11-209ENST00000622309 ZMAT1Q5H9K5 638 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 RASSF6Q6ZTQ3 369 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 FAM124AQ86V42 546 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 GPD1LQ8N335 351 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 Q8NFD4 153 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 LPAR1Q92633 364 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 TRIM43Q96BQ3 446 aaPredicted RBP7.73□□□□□ -1.17
VPS11-209ENST00000622309 VPS39Q96JC1 886 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 GPR137Q96N19 417 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 LINC00052Q96N35 136 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 GFM1Q96RP9 751 aaKnown RBP7.73□□□□□ -1.17
VPS11-209ENST00000622309 RHNO1Q9BSD3 238 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 OR51E2Q9H255 320 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 LDAHQ9H6V9 325 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 GPRC5BQ9NZH0 403 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 WRAP73Q9P2S5 460 aaPredicted RBP7.73□□□□□ -1.17
VPS11-209ENST00000622309 SH3BGRL2Q9UJC5 107 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 MGAT4AQ9UM21 535 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 TBX20Q9UMR3 447 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 A0A0B4J293 547 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 SH3D21A4FU49 640 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 TMEM150BA6NC51 233 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 SLC16A6O15403 523 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 PRSS23O95084 383 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 CYP4B1P13584 511 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 GDI1P31150 447 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 HOXC12P31275 282 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 CSKP41240 450 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 RAD52P43351 418 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 SULT1E1P49888 294 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 GTF2A2P52657 109 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 CDH17Q12864 832 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 HKDC1Q2TB90 917 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 GPR139Q6DWJ6 353 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 SCYL2Q6P3W7 929 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 KDELC1Q6UW63 502 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 FAM131AQ6UXB0 335 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 TFAP2EQ6VUC0 442 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 RRM2BQ7LG56 351 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 CUZD1Q86UP6 607 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 CLRN3Q8NCR9 226 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 CRYGNQ8WXF5 182 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 REPS1Q96D71 796 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 RNF31Q96EP0 1072 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 NPAS1Q99742 590 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 TINAGL1Q9GZM7 467 aaPredicted RBP7.73□□□□□ -1.17
VPS11-209ENST00000622309 SHARPINQ9H0F6 387 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 SMURF1Q9HCE7 757 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 COPZ2Q9P299 210 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 MLXQ9UH92 298 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 MAGEL2Q9UJ55 1249 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 ABT1Q9ULW3 272 aaKnown RBP7.73□□□□□ -1.17
VPS11-209ENST00000622309 PCDHGA9Q9Y5G4 932 aaKnown RBP7.73□□□□□ -1.17
VPS11-209ENST00000622309 CSADQ9Y600 493 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 OR6C65A6NJZ3 312 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 SPATA31C2B4DYI2 1134 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 SLC30A4O14863 429 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 SUPT7LO94864 414 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 ECDO95905 644 aaPredicted RBP7.73□□□□□ -1.17
VPS11-209ENST00000622309 SBK3P0C264 359 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 DIO1P49895 249 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 YBEYP58557 167 aaPredicted RBP7.73□□□□□ -1.17
VPS11-209ENST00000622309 RRAS2P62070 204 aaPredicted RBP7.73□□□□□ -1.17
VPS11-209ENST00000622309 DSC1Q08554 894 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 PTCHD3Q3KNS1 767 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 SLC35F1Q5T1Q4 408 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 CHMP1BQ7LBR1 199 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 DCP1BQ8IZD4 617 aaKnown RBP7.73□□□□□ -1.17
VPS11-209ENST00000622309 SRFBP1Q8NEF9 429 aaKnown RBP7.73□□□□□ -1.17
VPS11-209ENST00000622309 GPRASP2Q96D09 838 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 CCDC126Q96EE4 140 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 TMEM74Q96NL1 305 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 TEKT3Q9BXF9 490 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 MS4A7Q9GZW8 240 aaPredicted RBP7.73□□□□□ -1.17
VPS11-209ENST00000622309 ASAH2Q9NR71 780 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 NYAP2Q9P242 653 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 TINAGQ9UJW2 476 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 LIPT1Q9Y234 373 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 VPS9D1Q9Y2B5 631 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 ACOT9Q9Y305 439 aa7.73□□□□□ -1.17
VPS11-209ENST00000622309 PIPSLA2A3N6 862 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 VSTM5A8MXK1 200 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 PITPNM1O00562 1244 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 KHNYNO15037 678 aaKnown RBP7.72□□□□□ -1.17
VPS11-209ENST00000622309 INPPL1O15357 1258 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 ADAMTS4O75173 837 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 PMPCBO75439 489 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 POP4O95707 220 aaKnown RBP7.72□□□□□ -1.17
VPS11-209ENST00000622309 TSPAN12O95859 305 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 FABP1P07148 127 aa7.72□□□□□ -1.17
VPS11-209ENST00000622309 TPOP07202 933 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms