RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 FAM118AQ9NWS6 357 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 UTS2RQ9UKP6 389 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 CDC14AQ9UNH5 594 aa9.17□□□□□ -0.94
PDPN-212ENST00000621990 SOBPA7XYQ1 873 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 MOSPD3O75425 235 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 PSIP1O75475 530 aaKnown RBP9.16□□□□□ -0.94
PDPN-212ENST00000621990 RECQL5O94762 991 aaPredicted RBP9.16□□□□□ -0.94
PDPN-212ENST00000621990 FGF19O95750 216 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 MYCP01106 439 aaPredicted RBP9.16□□□□□ -0.94
PDPN-212ENST00000621990 FTH1P02794 183 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 CLTBP09497 229 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 CYP2A6P11509 494 aaPredicted RBP9.16□□□□□ -0.94
PDPN-212ENST00000621990 DCTP40126 519 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 TRPC1P48995 793 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 EMP3P54852 163 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 ABRQ12979 859 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 ZC3H12BQ5HYM0 836 aaKnown RBP9.16□□□□□ -0.94
PDPN-212ENST00000621990 ELMSAN1Q6PJG2 1045 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 EP400NLQ6ZTU2 488 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 CYP2U1Q7Z449 544 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 ARHGAP22Q7Z5H3 698 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 EID3Q8N140 333 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 TRAM1L1Q8N609 369 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 OR13F1Q8NGS4 319 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 ASZ1Q8WWH4 475 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 HDAC2Q92769 488 aaKnown RBP9.16□□□□□ -0.94
PDPN-212ENST00000621990 IRF7Q92985 503 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 PYCR2Q96C36 320 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 TIFAQ96CG3 184 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 FAM120BQ96EK7 910 aaKnown RBP9.16□□□□□ -0.94
PDPN-212ENST00000621990 VPS35Q96QK1 796 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 YME1L1Q96TA2 773 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 TBCDQ9BTW9 1192 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 BEGAINQ9BUH8 593 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 FAM83DQ9H4H8 585 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 POLR1BQ9H9Y6 1135 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 RAD18Q9NS91 495 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 SPATA6Q9NWH7 488 aaPredicted RBP9.16□□□□□ -0.94
PDPN-212ENST00000621990 ETAA1Q9NY74 926 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 TMEM9Q9P0T7 183 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 CD84Q9UIB8 345 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 GMEB1Q9Y692 573 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 CFAP99D6REC4 459 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 NEDD8-MDP1E9PL57 170 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 H3BMQ9 156 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 BNIP3LO60238 219 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 SCN2BO60939 215 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 SERPINA1P01009 418 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 CD22P20273 847 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 CRHBPP24387 322 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 ITGB8P26012 769 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 ELK4P28324 431 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 POLR2IP36954 125 aaKnown RBP9.16□□□□□ -0.94
PDPN-212ENST00000621990 IST1P53990 364 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 DCTN2Q13561 401 aaKnown RBP9.16□□□□□ -0.94
PDPN-212ENST00000621990 E2F2Q14209 437 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 ZIK1Q3SY52 487 aaPredicted RBP9.16□□□□□ -0.94
PDPN-212ENST00000621990 SLC44A4Q53GD3 710 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.16□□□□□ -0.94
PDPN-212ENST00000621990 LRRC73Q5JTD7 316 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 TMEM215Q68D42 235 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 C8orf59Q8N0T1 100 aaPredicted RBP9.16□□□□□ -0.94
PDPN-212ENST00000621990 OR8J2Q8NGG1 315 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 OR5K1Q8NHB7 308 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 FBLIM1Q8WUP2 373 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 GFM2Q969S9 779 aaKnown RBP9.16□□□□□ -0.94
PDPN-212ENST00000621990 PYURFQ96I23 114 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 MRGPRX3Q96LB0 322 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 COG8Q96MW5 612 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 TSSK3Q96PN8 268 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 ZSCAN5AQ9BUG6 496 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 BBS2Q9BXC9 721 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 GABARAPL1Q9H0R8 117 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 SMURF2Q9HAU4 748 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 THG1LQ9NWX6 298 aaKnown RBP9.16□□□□□ -0.94
PDPN-212ENST00000621990 MARK1Q9P0L2 795 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 IRAK3Q9Y616 596 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 DOCK6Q96HP0 2047 aa9.16□□□□□ -0.94
PDPN-212ENST00000621990 H0YIV9 168 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 QSOX1O00391 747 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 SEC14L2O76054 403 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 CCNDBP1O95273 360 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 SEMG1P04279 462 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 TYRP14679 529 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 PIGAP37287 484 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 KIR3DL1P43629 444 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 VEGFBP49765 207 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 RPS6KA3P51812 740 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 WNT3P56703 355 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 GABARAPL2P60520 117 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 SRSF11Q05519 484 aaKnown RBP9.15□□□□□ -0.94
PDPN-212ENST00000621990 SLC14A1Q13336 389 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 BIRC2Q13490 618 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 DUOXA1Q1HG43 343 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 XAF1Q6GPH4 301 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 TMEM179BQ7Z7N9 219 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 CPA6Q8N4T0 437 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 HCAR2Q8TDS4 363 aa9.15□□□□□ -0.94
PDPN-212ENST00000621990 SKA2Q8WVK7 121 aaPredicted RBP9.15□□□□□ -0.94
PDPN-212ENST00000621990 NELL1Q92832 810 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms