RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	IGLV3-16	A0A075B6K0	115 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944		A0A0J9YVX5	310 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	MAGEB3	O15480	346 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	LILRB3	O75022	631 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	CXCL14	O95715	111 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	LAG3	P18627	525 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	CYP2A7	P20853	494 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	CRHBP	P24387	322 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	PTPN6	P29350	595 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	SLC6A12	P48065	614 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	PFN3	P60673	137 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	PPP2R2B	Q00005	443 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	GTF2H3	Q13889	308 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	CCSMST1	Q4G0I0	132 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	BROX	Q5VW32	411 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	XKR5	Q6UX68	686 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	RNF165	Q6ZSG1	346 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	RBM23	Q86U06	439 aa	Known RBP	10.88	□□□□□ -0.67
TP53-223	ENST00000618944	ADHFE1	Q8IWW8	467 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	EID3	Q8N140	333 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	LILRA3	Q8N6C8	439 aa	Predicted RBP	10.88	□□□□□ -0.67
TP53-223	ENST00000618944	MED8	Q96G25	268 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	RBM4B	Q9BQ04	359 aa	Known RBP	10.88	□□□□□ -0.67
TP53-223	ENST00000618944	C19orf43	Q9BQ61	176 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	RBM4	Q9BWF3	364 aa	Known RBP	10.88	□□□□□ -0.67
TP53-223	ENST00000618944	LHPP	Q9H008	270 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	FAM83D	Q9H4H8	585 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	AASS	Q9UDR5	926 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	ERVK-11	Q9UQG0	969 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	PIKFYVE	Q9Y2I7	2098 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	LOC100130705	A0A1B0GUX0	176 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	FAM220BP	B1ANY3	271 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	NUAK1	O60285	661 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	FGF18	O76093	207 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	RET	P07949	1114 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	CYP4B1	P13584	511 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	ZNF182	P17025	639 aa	Predicted RBP	10.88	□□□□□ -0.67
TP53-223	ENST00000618944	CD22	P20273	847 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	HNMT	P50135	292 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	IRF8	Q02556	426 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	CD47	Q08722	323 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	BNIP3	Q12983	259 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	ARSI	Q5FYB1	569 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	XKR6	Q5GH73	641 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	C6orf141	Q5SZD1	244 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	LRIF1	Q5T3J3	769 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	XAF1	Q6GPH4	301 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	ADNP2	Q6IQ32	1131 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	SYT12	Q8IV01	421 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	PLPP6	Q8IY26	295 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	L3MBTL4	Q8NA19	623 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	CHDH	Q8NE62	594 aa	Predicted RBP	10.88	□□□□□ -0.67
TP53-223	ENST00000618944	OR2A12	Q8NGT7	310 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	SNX19	Q92543	992 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	ABTB1	Q969K4	478 aa	Predicted RBP	10.88	□□□□□ -0.67
TP53-223	ENST00000618944	PANX1	Q96RD7	426 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	DPH2	Q9BQC3	489 aa	Predicted RBP	10.88	□□□□□ -0.67
TP53-223	ENST00000618944	CPEB1	Q9BZB8	566 aa	Known RBP	10.88	□□□□□ -0.67
TP53-223	ENST00000618944	REXO4	Q9GZR2	422 aa	Known RBP	10.88	□□□□□ -0.67
TP53-223	ENST00000618944	PCDH12	Q9NPG4	1184 aa		10.88	□□□□□ -0.67
TP53-223	ENST00000618944	THG1L	Q9NWX6	298 aa	Known RBP	10.88	□□□□□ -0.67
TP53-223	ENST00000618944	TTC34	A8MYJ7	566 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	MYO1G	B0I1T2	1018 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	GFY	I3L273	518 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	hCG_2039718	K7EN88	272 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	FPGT	O14772	594 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	PFDN1	O60925	122 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	LEFTY1	O75610	366 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	HPR	P00739	348 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	PABPC1	P11940	636 aa	Known RBP	10.87	□□□□□ -0.67
TP53-223	ENST00000618944	CSF2RA	P15509	400 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	ENG	P17813	658 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	ITGB8	P26012	769 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	KIR3DL1	P43629	444 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	PREP	P48147	710 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	NRIP1	P48552	1158 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	ANKDD1A	Q495B1	522 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	TMEM215	Q68D42	235 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	KLHL35	Q6PF15	583 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	ELMSAN1	Q6PJG2	1045 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	DCP2	Q8IU60	420 aa	Known RBP	10.87	□□□□□ -0.67
TP53-223	ENST00000618944	GALNT13	Q8IUC8	556 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	ZDHHC21	Q8IVQ6	265 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	ZC3H7A	Q8IWR0	971 aa	Known RBP	10.87	□□□□□ -0.67
TP53-223	ENST00000618944	CLECL1	Q8IZS7	167 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	SPART	Q8N0X7	666 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	TCAIM	Q8N3R3	496 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	SVOPL	Q8N434	492 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	ZNF366	Q8N895	744 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	ARL10	Q8N8L6	244 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	KREMEN2	Q8NCW0	462 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	OR13F1	Q8NGS4	319 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	OR5K1	Q8NHB7	308 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	ZNF420	Q8TAQ5	688 aa	Predicted RBP	10.87	□□□□□ -0.67
TP53-223	ENST00000618944	CCDC138	Q96M89	665 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	ZNF641	Q96N77	438 aa	Predicted RBP	10.87	□□□□□ -0.67
TP53-223	ENST00000618944	RIOK2	Q9BVS4	552 aa	Known RBP	10.87	□□□□□ -0.67
TP53-223	ENST00000618944	DGCR6L	Q9BY27	220 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	CCDC90B	Q9GZT6	254 aa		10.87	□□□□□ -0.67
TP53-223	ENST00000618944	PAK6	Q9NQU5	681 aa	Predicted RBP	10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms