RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 ABRQ12979 859 aa14.4□□□□□ -0.1
UBXN1-218ENST00000616865 ZNF460Q14592 562 aa14.4□□□□□ -0.1
UBXN1-218ENST00000616865 KIR2DS5Q14953 304 aa14.4□□□□□ -0.1
UBXN1-218ENST00000616865 ATP1A1-AS1Q5TC04 95 aa14.4□□□□□ -0.1
UBXN1-218ENST00000616865 AGAP9Q5VTM2 703 aa14.4□□□□□ -0.1
UBXN1-218ENST00000616865 C16orf46Q6P387 395 aa14.4□□□□□ -0.1
UBXN1-218ENST00000616865 TTC23LQ6PF05 361 aa14.4□□□□□ -0.1
UBXN1-218ENST00000616865 SLC22A15Q8IZD6 547 aa14.4□□□□□ -0.1
UBXN1-218ENST00000616865 AVL9Q8NBF6 648 aa14.4□□□□□ -0.1
UBXN1-218ENST00000616865 GIMAP7Q8NHV1 300 aa14.4□□□□□ -0.1
UBXN1-218ENST00000616865 EEF1AKMT1Q8WVE0 214 aa14.4□□□□□ -0.1
UBXN1-218ENST00000616865 ZBTB9Q96C00 473 aa14.4□□□□□ -0.1
UBXN1-218ENST00000616865 CXorf40BQ96DE9 158 aa14.4□□□□□ -0.1
UBXN1-218ENST00000616865 CABS1Q96KC9 395 aa14.4□□□□□ -0.1
UBXN1-218ENST00000616865 C12orf66Q96MD2 445 aa14.4□□□□□ -0.1
UBXN1-218ENST00000616865 SLC30A3Q99726 388 aa14.4□□□□□ -0.1
UBXN1-218ENST00000616865 STMN4Q9H169 189 aaPredicted RBP14.4□□□□□ -0.1
UBXN1-218ENST00000616865 MED16Q9Y2X0 877 aa14.4□□□□□ -0.1
UBXN1-218ENST00000616865 ACOT9Q9Y305 439 aa14.4□□□□□ -0.1
UBXN1-218ENST00000616865 HEBP2Q9Y5Z4 205 aa14.4□□□□□ -0.1
UBXN1-218ENST00000616865 MRPS18BQ9Y676 258 aaKnown RBP14.4□□□□□ -0.1
UBXN1-218ENST00000616865 A0A096LPK6 155 aa14.39□□□□□ -0.11
UBXN1-218ENST00000616865 PRR19A6NJB7 356 aa14.39□□□□□ -0.11
UBXN1-218ENST00000616865 EIF3FO00303 357 aaPredicted RBP14.39□□□□□ -0.11
UBXN1-218ENST00000616865 DYNC1I1O14576 645 aa14.39□□□□□ -0.11
UBXN1-218ENST00000616865 SLCO2B1O94956 709 aa14.39□□□□□ -0.11
UBXN1-218ENST00000616865 RPN2P04844 631 aa14.39□□□□□ -0.11
UBXN1-218ENST00000616865 CCDC166P0CW27 439 aa14.39□□□□□ -0.11
UBXN1-218ENST00000616865 MPC1LP0DKB6 136 aa14.39□□□□□ -0.11
UBXN1-218ENST00000616865 GFERP55789 205 aa14.39□□□□□ -0.11
UBXN1-218ENST00000616865 TIAL1Q01085 375 aaKnown RBP eCLIP14.39□□□□□ -0.11
UBXN1-218ENST00000616865 KLRB1Q12918 225 aa14.39□□□□□ -0.11
UBXN1-218ENST00000616865 WASH2PQ6VEQ5 465 aa14.39□□□□□ -0.11
UBXN1-218ENST00000616865 TIFABQ6ZNK6 161 aa14.39□□□□□ -0.11
UBXN1-218ENST00000616865 PLXDC1Q8IUK5 500 aa14.39□□□□□ -0.11
UBXN1-218ENST00000616865 FAM26EQ8N5C1 309 aa14.39□□□□□ -0.11
UBXN1-218ENST00000616865 VIPAS39Q9H9C1 493 aa14.39□□□□□ -0.11
UBXN1-218ENST00000616865 WASH6PQ9NQA3 447 aa14.39□□□□□ -0.11
UBXN1-218ENST00000616865 IMP3Q9NV31 184 aaKnown RBP14.39□□□□□ -0.11
UBXN1-218ENST00000616865 CPNE7Q9UBL6 633 aa14.39□□□□□ -0.11
UBXN1-218ENST00000616865 LGALS13Q9UHV8 139 aa14.39□□□□□ -0.11
UBXN1-218ENST00000616865 TP53TG5Q9Y2B4 290 aa14.39□□□□□ -0.11
UBXN1-218ENST00000616865 MAN2B2Q9Y2E5 1009 aa14.39□□□□□ -0.11
UBXN1-218ENST00000616865 HMX2A2RU54 273 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 C9P02748 559 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 ALDOAP04075 364 aaKnown RBP14.38□□□□□ -0.11
UBXN1-218ENST00000616865 C2P06681 752 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 ZNF37AP17032 561 aaPredicted RBP14.38□□□□□ -0.11
UBXN1-218ENST00000616865 ZNF28P17035 718 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 F8A1P23610 371 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 UBE2IP63279 158 aaKnown RBP14.38□□□□□ -0.11
UBXN1-218ENST00000616865 FOXM1Q08050 763 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 CSHL1Q14406 222 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 ZKSCAN8Q15776 578 aaPredicted RBP14.38□□□□□ -0.11
UBXN1-218ENST00000616865 FAM83EQ2M2I3 478 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 ZNF658BQ4V348 819 aaPredicted RBP14.38□□□□□ -0.11
UBXN1-218ENST00000616865 KLC3Q6P597 504 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 ABRAXAS1Q6UWZ7 409 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 NEK10Q6ZWH5 1172 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 VRK3Q8IV63 474 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 CYP4X1Q8N118 509 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 ACMSDQ8TDX5 336 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 ANKRD7Q92527 254 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 TFGQ92734 400 aaPredicted RBP14.38□□□□□ -0.11
UBXN1-218ENST00000616865 MIB2Q96AX9 1013 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 RMDN2Q96LZ7 410 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 FERD3LQ96RJ6 166 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 ULBP3Q9BZM4 244 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 OR52A5Q9H2C5 316 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 UCK1Q9HA47 277 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 NMRAL1Q9HBL8 299 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 PCMTD2Q9NV79 361 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 CDYLQ9Y232 598 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 ASF1AQ9Y294 204 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 KCNMB2Q9Y691 235 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 CFAP20Q9Y6A4 193 aaKnown RBP14.38□□□□□ -0.11
UBXN1-218ENST00000616865 COLEC10Q9Y6Z7 277 aa14.38□□□□□ -0.11
UBXN1-218ENST00000616865 NBPF19A0A087WUL8 3843 aa14.37□□□□□ -0.11
UBXN1-218ENST00000616865 GOLGA8RI6L899 631 aa14.37□□□□□ -0.11
UBXN1-218ENST00000616865 KDM1AO60341 852 aa14.37□□□□□ -0.11
UBXN1-218ENST00000616865 VIPP01282 170 aa14.37□□□□□ -0.11
UBXN1-218ENST00000616865 CATP04040 527 aaKnown RBP14.37□□□□□ -0.11
UBXN1-218ENST00000616865 LTA4HP09960 611 aaKnown RBP14.37□□□□□ -0.11
UBXN1-218ENST00000616865 SLC35E2BP0CK96 405 aa14.37□□□□□ -0.11
UBXN1-218ENST00000616865 PYGBP11216 843 aa14.37□□□□□ -0.11
UBXN1-218ENST00000616865 NR1D1P20393 614 aa14.37□□□□□ -0.11
UBXN1-218ENST00000616865 NDUFS1P28331 727 aa14.37□□□□□ -0.11
UBXN1-218ENST00000616865 DLSTP36957 453 aa14.37□□□□□ -0.11
UBXN1-218ENST00000616865 CD97P48960 835 aa14.37□□□□□ -0.11
UBXN1-218ENST00000616865 KPNA2P52292 529 aaKnown RBP14.37□□□□□ -0.11
UBXN1-218ENST00000616865 GBX1Q14549 363 aa14.37□□□□□ -0.11
UBXN1-218ENST00000616865 RPE65Q16518 533 aa14.37□□□□□ -0.11
UBXN1-218ENST00000616865 CAPRIN2Q6IMN6 1127 aaKnown RBP14.37□□□□□ -0.11
UBXN1-218ENST00000616865 UNC5DQ6UXZ4 953 aa14.37□□□□□ -0.11
UBXN1-218ENST00000616865 PIWIL4Q7Z3Z4 852 aaKnown RBP14.37□□□□□ -0.11
UBXN1-218ENST00000616865 SRRM1Q8IYB3 904 aaKnown RBP14.37□□□□□ -0.11
UBXN1-218ENST00000616865 PHC3Q8NDX5 983 aa14.37□□□□□ -0.11
UBXN1-218ENST00000616865 SPDYE1Q8NFV5 336 aaPredicted RBP14.37□□□□□ -0.11
UBXN1-218ENST00000616865 MAGEC3Q8TD91 643 aa14.37□□□□□ -0.11
UBXN1-218ENST00000616865 SCYL1Q96KG9 808 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms