RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 ABHD18Q0P651 414 aa16.09■□□□□ 0.17
CBWD3-211ENST00000615061 EFTUD2Q15029 972 aaKnown RBP eCLIP16.09■□□□□ 0.17
CBWD3-211ENST00000615061 KBTBD12Q3ZCT8 623 aa16.09■□□□□ 0.17
CBWD3-211ENST00000615061 FIGLAQ6QHK4 219 aa16.09■□□□□ 0.17
CBWD3-211ENST00000615061 CEP97Q8IW35 865 aa16.09■□□□□ 0.17
CBWD3-211ENST00000615061 CTAGE3PQ8IX95 158 aa16.09■□□□□ 0.17
CBWD3-211ENST00000615061 MYO1HQ8N1T3 1032 aa16.09■□□□□ 0.17
CBWD3-211ENST00000615061 DNAJC22Q8N4W6 341 aa16.09■□□□□ 0.17
CBWD3-211ENST00000615061 OR2L3Q8NG85 312 aa16.09■□□□□ 0.17
CBWD3-211ENST00000615061 FBF1Q8TES7 1133 aa16.09■□□□□ 0.17
CBWD3-211ENST00000615061 SNRNP27Q8WVK2 155 aaKnown RBP16.09■□□□□ 0.17
CBWD3-211ENST00000615061 CDKL2Q92772 493 aa16.09■□□□□ 0.17
CBWD3-211ENST00000615061 FCRL4Q96PJ5 515 aa16.09■□□□□ 0.17
CBWD3-211ENST00000615061 SPRTNQ9H040 489 aaPredicted RBP16.09■□□□□ 0.17
CBWD3-211ENST00000615061 CAB39LQ9H9S4 337 aa16.09■□□□□ 0.17
CBWD3-211ENST00000615061 GPN2Q9H9Y4 310 aaPredicted RBP16.09■□□□□ 0.17
CBWD3-211ENST00000615061 ABCF3Q9NUQ8 709 aa16.09■□□□□ 0.17
CBWD3-211ENST00000615061 NSMCE4AQ9NXX6 385 aa16.09■□□□□ 0.17
CBWD3-211ENST00000615061 MTO1Q9Y2Z2 717 aaKnown RBP16.09■□□□□ 0.17
CBWD3-211ENST00000615061 MRPS18BQ9Y676 258 aaKnown RBP16.09■□□□□ 0.17
CBWD3-211ENST00000615061 E7ENX8 843 aa16.08■□□□□ 0.17
CBWD3-211ENST00000615061 H3BMH7 237 aa16.08■□□□□ 0.17
CBWD3-211ENST00000615061 FAM155BO75949 473 aa16.08■□□□□ 0.17
CBWD3-211ENST00000615061 IL2P60568 153 aa16.08■□□□□ 0.17
CBWD3-211ENST00000615061 TAP2Q03519 686 aa16.08■□□□□ 0.17
CBWD3-211ENST00000615061 GPS2Q13227 327 aa16.08■□□□□ 0.17
CBWD3-211ENST00000615061 MAP7Q14244 749 aa16.08■□□□□ 0.17
CBWD3-211ENST00000615061 CYS1Q717R9 158 aa16.08■□□□□ 0.17
CBWD3-211ENST00000615061 SYTL1Q8IYJ3 562 aa16.08■□□□□ 0.17
CBWD3-211ENST00000615061 CEP112Q8N8E3 955 aa16.08■□□□□ 0.17
CBWD3-211ENST00000615061 OR8K5Q8NH50 307 aa16.08■□□□□ 0.17
CBWD3-211ENST00000615061 RUFY1Q96T51 708 aa16.08■□□□□ 0.17
CBWD3-211ENST00000615061 SYTL2Q9HCH5 934 aa16.08■□□□□ 0.17
CBWD3-211ENST00000615061 LHX9Q9NQ69 397 aa16.08■□□□□ 0.17
CBWD3-211ENST00000615061 CROTQ9UKG9 612 aa16.08■□□□□ 0.17
CBWD3-211ENST00000615061 CPNE3O75131 537 aaKnown RBP16.08■□□□□ 0.16
CBWD3-211ENST00000615061 GSTA2P09210 222 aa16.08■□□□□ 0.16
CBWD3-211ENST00000615061 ZNF37AP17032 561 aaPredicted RBP16.08■□□□□ 0.16
CBWD3-211ENST00000615061 CYP2A7P20853 494 aa16.08■□□□□ 0.16
CBWD3-211ENST00000615061 ITGA1P56199 1179 aa16.08■□□□□ 0.16
CBWD3-211ENST00000615061 ARHGAP19Q14CB8 494 aa16.08■□□□□ 0.16
CBWD3-211ENST00000615061 GLE1Q53GS7 698 aaKnown RBP16.08■□□□□ 0.16
CBWD3-211ENST00000615061 LCN10Q6JVE6 187 aa16.08■□□□□ 0.16
CBWD3-211ENST00000615061 LRRC8EQ6NSJ5 796 aa16.08■□□□□ 0.16
CBWD3-211ENST00000615061 LRRC56Q8IYG6 542 aaPredicted RBP16.08■□□□□ 0.16
CBWD3-211ENST00000615061 PPM1NQ8N819 430 aa16.08■□□□□ 0.16
CBWD3-211ENST00000615061 ANKRD49Q8WVL7 239 aa16.08■□□□□ 0.16
CBWD3-211ENST00000615061 SMPDL3AQ92484 453 aa16.08■□□□□ 0.16
CBWD3-211ENST00000615061 N4BP2L2Q92802 583 aaPredicted RBP16.08■□□□□ 0.16
CBWD3-211ENST00000615061 SLC12A9Q9BXP2 914 aa16.08■□□□□ 0.16
CBWD3-211ENST00000615061 CHRNA10Q9GZZ6 450 aa16.08■□□□□ 0.16
CBWD3-211ENST00000615061 SLC6A20Q9NP91 592 aa16.08■□□□□ 0.16
CBWD3-211ENST00000615061 TAC3Q9UHF0 121 aa16.08■□□□□ 0.16
CBWD3-211ENST00000615061 SERTAD3Q9UJW9 196 aa16.08■□□□□ 0.16
CBWD3-211ENST00000615061 PADI1Q9ULC6 663 aa16.08■□□□□ 0.16
CBWD3-211ENST00000615061 ZNF749O43361 778 aa16.07■□□□□ 0.16
CBWD3-211ENST00000615061 CTSVO60911 334 aa16.07■□□□□ 0.16
CBWD3-211ENST00000615061 OR2B3O76000 313 aa16.07■□□□□ 0.16
CBWD3-211ENST00000615061 C8GP07360 202 aa16.07■□□□□ 0.16
CBWD3-211ENST00000615061 DLSTP36957 453 aa16.07■□□□□ 0.16
CBWD3-211ENST00000615061 BBC3Q96PG8 261 aaPredicted RBP16.07■□□□□ 0.16
CBWD3-211ENST00000615061 RBBP8Q99708 897 aa16.07■□□□□ 0.16
CBWD3-211ENST00000615061 CPNE1Q99829 537 aa16.07■□□□□ 0.16
CBWD3-211ENST00000615061 UNKQ9C0B0 810 aaKnown RBP16.07■□□□□ 0.16
CBWD3-211ENST00000615061 PARVBQ9HBI1 364 aa16.07■□□□□ 0.16
CBWD3-211ENST00000615061 NINJ2Q9NZG7 142 aa16.07■□□□□ 0.16
CBWD3-211ENST00000615061 STOX2Q9P2F5 926 aaPredicted RBP16.07■□□□□ 0.16
CBWD3-211ENST00000615061 PCDHB3Q9Y5E6 796 aa16.07■□□□□ 0.16
CBWD3-211ENST00000615061 IGKV1-8A0A0C4DH67 115 aa16.06■□□□□ 0.16
CBWD3-211ENST00000615061 E7EQ34 232 aa16.06■□□□□ 0.16
CBWD3-211ENST00000615061 TERTO14746 1132 aaKnown RBP16.06■□□□□ 0.16
CBWD3-211ENST00000615061 CCNYL3P0C7X3 344 aa16.06■□□□□ 0.16
CBWD3-211ENST00000615061 RPA3P35244 121 aaPredicted RBP16.06■□□□□ 0.16
CBWD3-211ENST00000615061 GP5P40197 560 aa16.06■□□□□ 0.16
CBWD3-211ENST00000615061 ZXDCQ2QGD7 858 aaPredicted RBP16.06■□□□□ 0.16
CBWD3-211ENST00000615061 PTCHD3Q3KNS1 767 aa16.06■□□□□ 0.16
CBWD3-211ENST00000615061 MCOLN3Q8TDD5 553 aa16.06■□□□□ 0.16
CBWD3-211ENST00000615061 CT55Q8WUE5 264 aa16.06■□□□□ 0.16
CBWD3-211ENST00000615061 KIAA1143Q96AT1 154 aaPredicted RBP16.06■□□□□ 0.16
CBWD3-211ENST00000615061 CLIP3Q96DZ5 547 aa16.06■□□□□ 0.16
CBWD3-211ENST00000615061 DPH7Q9BTV6 452 aa16.06■□□□□ 0.16
CBWD3-211ENST00000615061 ATG10Q9H0Y0 220 aa16.06■□□□□ 0.16
CBWD3-211ENST00000615061 ACTR5Q9H9F9 607 aaPredicted RBP16.06■□□□□ 0.16
CBWD3-211ENST00000615061 PCMTD2Q9NV79 361 aa16.06■□□□□ 0.16
CBWD3-211ENST00000615061 EURLQ9NYK6 297 aa16.06■□□□□ 0.16
CBWD3-211ENST00000615061 TXNDC16Q9P2K2 825 aa16.06■□□□□ 0.16
CBWD3-211ENST00000615061 MTRF1LQ9UGC7 380 aaKnown RBP16.06■□□□□ 0.16
CBWD3-211ENST00000615061 PLCL2Q9UPR0 1127 aa16.06■□□□□ 0.16
CBWD3-211ENST00000615061 NKX2-8O15522 239 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 PHGDHO43175 533 aaKnown RBP16.05■□□□□ 0.16
CBWD3-211ENST00000615061 MT-ND3P03897 115 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 RHOXF2BP0C7M4 288 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 ATXN8OSP0DMR3 200 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 TCN2P20062 427 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 STX2P32856 288 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 RORAP35398 523 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 GMPRP36959 345 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 TBPL1P62380 186 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 SP140Q13342 867 aa16.05■□□□□ 0.16
CBWD3-211ENST00000615061 MCATQ8IVS2 390 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms