RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 DCKP27707 260 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 EEF1DP29692 281 aaKnown RBP8.6□□□□□ -1.03
VPS11-206ENST00000614944 GRIA4P48058 902 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 PRIM2P49643 509 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 SUOXP51687 545 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 NFATC3Q12968 1075 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 BNIP2Q12982 314 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 GRM7Q14831 915 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 C6orf52Q5T4I8 152 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 FAXCQ5TGI0 409 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 GPR107Q5VW38 600 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 PDPK2PQ6A1A2 396 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 KIAA0408Q6ZU52 694 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 ADIPOR2Q86V24 386 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 ZNF354CQ86Y25 554 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 TMEM25Q86YD3 366 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 PPHLN1Q8NEY8 458 aaKnown RBP8.6□□□□□ -1.03
VPS11-206ENST00000614944 OR52K1Q8NGK4 314 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 GPR150Q8NGU9 434 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 WFDC5Q8TCV5 224 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 RSPRY1Q96DX4 576 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 CNDP2Q96KP4 475 aaKnown RBP8.6□□□□□ -1.03
VPS11-206ENST00000614944 C9orf72Q96LT7 481 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 PWWP2AQ96N64 755 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 ZFP14Q9HCL3 533 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.6□□□□□ -1.03
VPS11-206ENST00000614944 SLC25A13Q9UJS0 675 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 VPS28Q9UK41 221 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 INTS6Q9UL03 887 aaKnown RBP8.6□□□□□ -1.03
VPS11-206ENST00000614944 CEP350Q5VT06 3117 aa8.6□□□□□ -1.03
VPS11-206ENST00000614944 ANKRD36A6QL64 1941 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 A8MVJ9 347 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 PSMD9O00233 223 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 CTDSP2O14595 271 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 PCDH17O14917 1159 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 ZNF821O75541 412 aaPredicted RBP8.59□□□□□ -1.03
VPS11-206ENST00000614944 PAMP19021 973 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 MGAT1P26572 445 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 TMEM95Q3KNT9 176 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 ATAD3CQ5T2N8 411 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 TMEM65Q6PI78 240 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 BTLAQ7Z6A9 289 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 ZBTB44Q8NCP5 570 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 SRFBP1Q8NEF9 429 aaKnown RBP8.59□□□□□ -1.03
VPS11-206ENST00000614944 VOPP1Q96AW1 172 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 SH3YL1Q96HL8 342 aaPredicted RBP8.59□□□□□ -1.03
VPS11-206ENST00000614944 APOPT1Q96IL0 206 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 SEMA3CQ99985 751 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 FSD1LQ9BXM9 530 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 C20orf96Q9NUD7 363 aaPredicted RBP8.59□□□□□ -1.03
VPS11-206ENST00000614944 TMEM9Q9P0T7 183 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 COPS3Q9UNS2 423 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 INVSQ9Y283 1065 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 SLC22A7Q9Y694 548 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 A0A087WXM4 84 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 EXOC1LA0A1B0GW35 172 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 HEPACAM2A8MVW5 462 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 H3BNH8 94 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 H7C0S8 307 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 ARNTLO00327 626 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 PLD2O14939 933 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 PRPF4O43172 522 aaKnown RBP eCLIP8.59□□□□□ -1.03
VPS11-206ENST00000614944 BCAS1O75363 584 aaPredicted RBP8.59□□□□□ -1.03
VPS11-206ENST00000614944 ACSL3O95573 720 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 BPNT1O95861 308 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 IGSF6O95976 241 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 LAMP2P13473 410 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 LTBRP36941 435 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 OPRL1P41146 370 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 CSRP3P50461 194 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 DSC2Q02487 901 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 GEN1Q17RS7 908 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 PDSS1Q5T2R2 415 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 UBAP2Q5T6F2 1119 aaKnown RBP8.59□□□□□ -1.03
VPS11-206ENST00000614944 LGSNQ5TDP6 509 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 ABRAXAS1Q6UWZ7 409 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 KIAA1324Q6UXG2 1013 aaKnown RBP8.59□□□□□ -1.03
VPS11-206ENST00000614944 DNAAF3Q8N9W5 541 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 S100ZQ8WXG8 99 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 KLHL6Q8WZ60 621 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 FICDQ9BVA6 458 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 ZNF416Q9BWM5 594 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 BBS2Q9BXC9 721 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 ADGRE3Q9BY15 652 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 PCDHB16Q9NRJ7 776 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 CD274Q9NZQ7 290 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 ANKRD6Q9Y2G4 727 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 ISPDA4D126 451 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 LINC01565O15544 149 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 SLC7A4O43246 635 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 TRIM16O95361 564 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 RNF224P0DH78 156 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 ZNF16P17020 682 aaPredicted RBP8.59□□□□□ -1.03
VPS11-206ENST00000614944 CBLP22681 906 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 CD70P32970 193 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 MAGEA12P43365 314 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 CPA2P48052 419 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 SNRPD1P62314 119 aaKnown RBP8.59□□□□□ -1.03
VPS11-206ENST00000614944 SGCGQ13326 291 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 ENPP2Q13822 863 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms