RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 SLC2A13Q96QE2 648 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 C9orf16Q9BUW7 83 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 CWH43Q9H720 699 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 SPAG4Q9NPE6 437 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 IFT80Q9P2H3 777 aaPredicted RBP10.59□□□□□ -0.71
FAM3A-221ENST00000612856 RIMS3Q9UJD0 308 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 OTOFQ9HC10 1997 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 RSL1D1O76021 490 aaKnown RBP10.59□□□□□ -0.71
FAM3A-221ENST00000612856 NCK1P16333 377 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 EPORP19235 508 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 KELP23276 732 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 PRDX6P30041 224 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 S100A5P33763 92 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 TP53BP2Q13625 1128 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 DPYSQ14117 519 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 SLC9A5Q14940 896 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 PCBP2Q15366 365 aaKnown RBP eCLIP10.59□□□□□ -0.71
FAM3A-221ENST00000612856 CADM3Q8N126 398 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 WFDC5Q8TCV5 224 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 FAM162AQ96A26 154 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 RPRD1BQ9NQG5 326 aaKnown RBP10.59□□□□□ -0.71
FAM3A-221ENST00000612856 OLAHQ9NV23 265 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 NCDNQ9UBB6 729 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 ERVK-11Q9UQG0 969 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 HTTP42858 3142 aa10.59□□□□□ -0.71
FAM3A-221ENST00000612856 CDC7O00311 574 aa10.58□□□□□ -0.71
FAM3A-221ENST00000612856 MPOP05164 745 aa10.58□□□□□ -0.71
FAM3A-221ENST00000612856 DBTP11182 482 aaKnown RBP10.58□□□□□ -0.71
FAM3A-221ENST00000612856 MYCLP1P12525 358 aaPredicted RBP10.58□□□□□ -0.71
FAM3A-221ENST00000612856 IL5RAQ01344 420 aa10.58□□□□□ -0.71
FAM3A-221ENST00000612856 TRIM71Q2Q1W2 868 aaKnown RBP10.58□□□□□ -0.71
FAM3A-221ENST00000612856 GPR135Q8IZ08 494 aa10.58□□□□□ -0.71
FAM3A-221ENST00000612856 FSTL5Q8N475 847 aaPredicted RBP10.58□□□□□ -0.71
FAM3A-221ENST00000612856 ZNF555Q8NEP9 628 aa10.58□□□□□ -0.71
FAM3A-221ENST00000612856 OR9I1Q8NGQ6 314 aa10.58□□□□□ -0.71
FAM3A-221ENST00000612856 FBXO30Q8TB52 745 aa10.58□□□□□ -0.71
FAM3A-221ENST00000612856 IL17FQ96PD4 163 aa10.58□□□□□ -0.71
FAM3A-221ENST00000612856 ARPC5LQ9BPX5 153 aa10.58□□□□□ -0.71
FAM3A-221ENST00000612856 FOXQ1Q9C009 403 aa10.58□□□□□ -0.71
FAM3A-221ENST00000612856 BOLA1Q9Y3E2 137 aa10.58□□□□□ -0.71
FAM3A-221ENST00000612856 CENPXA8MT69 81 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 MAFKO60675 156 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 SLC16A1P53985 500 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 ZNF234Q14588 700 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 WDR45BQ5MNZ6 344 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 SAMD4BQ5PRF9 694 aaKnown RBP10.58□□□□□ -0.72
FAM3A-221ENST00000612856 GPRC6AQ5T6X5 926 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 EFL1Q7Z2Z2 1120 aaKnown RBP10.58□□□□□ -0.72
FAM3A-221ENST00000612856 METTL3Q86U44 580 aaKnown RBP10.58□□□□□ -0.72
FAM3A-221ENST00000612856 ANKRD46Q86W74 232 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 PHOSPHO2Q8TCD6 241 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 OLFM1Q99784 485 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 EBPLQ9BY08 206 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 ZBP1Q9H171 429 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 TMEM248Q9NWD8 314 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 COLQQ9Y215 455 aaPredicted RBP10.58□□□□□ -0.72
FAM3A-221ENST00000612856 ORC6Q9Y5N6 252 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 SPACA6W5XKT8 324 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 UNC13CQ8NB66 2214 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 LDLRP01130 860 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 HOXD8P13378 290 aaPredicted RBP10.58□□□□□ -0.72
FAM3A-221ENST00000612856 AKT2P31751 481 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 GJA4P35212 333 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 HPCAL1P37235 193 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 CCR2P41597 374 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 SSR2P43308 183 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 FAM189BP81408 668 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 CACNG1Q06432 222 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 PCLAFQ15004 111 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 PHKG1Q16816 387 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 PHF19Q5T6S3 580 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 ANKRD26P1Q6NSI1 321 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 POMZP3Q6PJE2 187 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 RFLNAQ6ZTI6 216 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 BTLAQ7Z6A9 289 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 C17orf64Q86WR6 236 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 PMEPA1Q969W9 287 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 SAMD11Q96NU1 681 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 RBCK1Q9BYM8 510 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 IPPKQ9H8X2 491 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 MARCH4Q9P2E8 410 aaPredicted RBP10.58□□□□□ -0.72
FAM3A-221ENST00000612856 GMPR2Q9P2T1 348 aaKnown RBP10.58□□□□□ -0.72
FAM3A-221ENST00000612856 PSME2Q9UL46 239 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 KLHL20Q9Y2M5 609 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 PARP14Q460N5 1801 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 LOC100506127A0A0U1RQW1 187 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 KDELR3O43731 214 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 OR1F1O43749 312 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 BCAS2O75934 225 aaPredicted RBP10.58□□□□□ -0.72
FAM3A-221ENST00000612856 ATP5F1P24539 256 aaPredicted RBP10.58□□□□□ -0.72
FAM3A-221ENST00000612856 CENPAP49450 140 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 ARHGDIAP52565 204 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 DGUOKQ16854 277 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 TMEM236Q5W0B7 351 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 MBOAT1Q6ZNC8 495 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 ADAMTSL2Q86TH1 951 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 PLD6Q8N2A8 252 aaKnown RBP10.58□□□□□ -0.72
FAM3A-221ENST00000612856 FAM160A2Q8N612 972 aaPredicted RBP10.58□□□□□ -0.72
FAM3A-221ENST00000612856 ZBTB2Q8N680 514 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 RORBQ92753 470 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms