RNA–Protein interactions for RNA: ENST00000610583.1

PCDHGA6-202, Transcript of protocadherin gamma subfamily A, 6, humanhuman

APPRIS P1 BASIC

Gene PCDHGA6, Length 5,650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-202ENST00000610583 SP140Q13342 867 aa13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 PTCHD3Q3KNS1 767 aa13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 AGTRAPQ6RW13 159 aa13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 FAM43BQ6ZT52 329 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 CMTR2Q8IYT2 770 aaKnown RBP13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 ZNF433Q8N7K0 673 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 TRIM63Q969Q1 353 aa13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 LRRC58Q96CX6 371 aa13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 RETREG1Q9H6L5 497 aa13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 SPHK2Q9NRA0 654 aa13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 FLRT1Q9NZU1 646 aa13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 C10orf71Q711Q0 1435 aa13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 MANBAO00462 879 aa13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 RPP38P78345 283 aaKnown RBP13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 BTN3A2P78410 334 aa13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 ZCCHC12Q6PEW1 402 aa13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 FAM131AQ6UXB0 335 aa13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 FRRS1Q6ZNA5 592 aa13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 OR10T2Q8NGX3 314 aa13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 OR52B2Q96RD2 323 aa13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 PDCD10Q9BUL8 212 aa13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 FZD4Q9ULV1 537 aa13.78□□□□□ -0.2
PCDHGA6-202ENST00000610583 IGKV6D-21A0A0A0MT36 114 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 IQCMA0A1B0GVH7 501 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 STX16-NPEPL1H3BU86 382 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 STX16O14662 325 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 SLC30A4O14863 429 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 KLHL18O94889 574 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 PGLSO95336 258 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 PIK3CBP42338 1070 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 DSTNP60981 165 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 NUP54Q7Z3B4 507 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 RNF31Q96EP0 1072 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 CAMK1GQ96NX5 476 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 EME2A4GXA9 379 aaPredicted RBP13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 TMEM233B4DJY2 109 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 LOC110117498-PIK3R3F6TDL0 507 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 FAM72CH0Y354 149 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 TLX3O43711 291 aaPredicted RBP13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 LDOC1O95751 146 aaPredicted RBP13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 ETS2P15036 469 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 S100GP29377 79 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 GKP32189 559 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 GDF5P43026 501 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 NRG3P56975 720 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 TARDBPQ13148 414 aaKnown RBP eCLIP13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 ADGRE1Q14246 886 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 FAM72AQ5TYM5 149 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 OR4F3Q6IEY1 312 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 FAM72DQ6L9T8 149 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 SMARCD3Q6STE5 483 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 FAM72BQ86X60 149 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 OR4E2Q8NGC2 313 aa13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 WDR12Q9GZL7 423 aaKnown RBP13.77□□□□□ -0.2
PCDHGA6-202ENST00000610583 AQP12BA6NM10 295 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 GRID2O43424 1007 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 AP2A2O94973 939 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 AGR2O95994 175 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 CYP11A1P05108 521 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 HNRNPA1P09651 372 aaKnown RBP eCLIP13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 ENGP17813 658 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 INAVAQ3KP66 663 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 LCN1P1Q5VSP4 162 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 SMYD5Q6GMV2 418 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 AQP12AQ8IXF9 295 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 NXPE1Q8N323 547 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 NODALQ96S42 347 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 FEM1AQ9BSK4 669 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 YIPF4Q9BSR8 244 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 MOCS1Q9NZB8 636 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 P2RX2Q9UBL9 471 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 PHF11Q9UIL8 331 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 MYADML2A6NDP7 307 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 CPSF4LA6NMK7 179 aaKnown RBP13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 KLF11O14901 512 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 C9P02748 559 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 AGXTP21549 392 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 CREB5Q02930 508 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 PTPRCAPQ14761 206 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 TRPV3Q8NET8 790 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 KCNJ9Q92806 393 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 DGAT2Q96PD7 388 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 CGREF1Q99674 301 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 IFT27Q9BW83 186 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 PCDHAC1Q9H158 963 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 IL23AQ9NPF7 189 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 SLC2A4RGQ9NR83 387 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 PCDHB11Q9Y5F2 797 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 ABLIM1O14639 778 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 EBLN1P0CF75 366 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 KCNA5P22460 613 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 Q6ZVL8 140 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 DCUN1D3Q8IWE4 304 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 COL21A1Q96P44 957 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 KLHL31Q9H511 634 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 GMEB2Q9UKD1 530 aa13.77□□□□□ -0.21
PCDHGA6-202ENST00000610583 H3BNX3 289 aa13.76□□□□□ -0.21
PCDHGA6-202ENST00000610583 REM1O75628 298 aa13.76□□□□□ -0.21
PCDHGA6-202ENST00000610583 MTHFD1P11586 935 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms