RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 KCND3Q9UK17 655 aa13.92□□□□□ -0.18
HDDC2-204ENST00000608295 ADAMTS6Q9UKP5 1117 aa13.92□□□□□ -0.18
HDDC2-204ENST00000608295 SNX7Q9UNH6 387 aa13.92□□□□□ -0.18
HDDC2-204ENST00000608295 MAN2B2Q9Y2E5 1009 aa13.92□□□□□ -0.18
HDDC2-204ENST00000608295 DHRS7Q9Y394 339 aa13.92□□□□□ -0.18
HDDC2-204ENST00000608295 TNRC6AQ8NDV7 1962 aaKnown RBP13.92□□□□□ -0.18
HDDC2-204ENST00000608295 HEATR5BQ9P2D3 2071 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 FAM187AA6NFU0 413 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 CTSVO60911 334 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 SLC16A8O95907 504 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 EIF2S1P05198 315 aaKnown RBP13.91□□□□□ -0.18
HDDC2-204ENST00000608295 NR1D1P20393 614 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 ALAS2P22557 587 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 PTPN4P29074 926 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 CCR10P46092 362 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 PNLIPRP1P54315 467 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 VSX2P58304 361 aaPredicted RBP13.91□□□□□ -0.18
HDDC2-204ENST00000608295 TIAL1Q01085 375 aaKnown RBP eCLIP13.91□□□□□ -0.18
HDDC2-204ENST00000608295 SLC7A5Q01650 507 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 MC1RQ01726 317 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 C19orf57Q0VDD7 668 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 PDAP1Q13442 181 aaKnown RBP13.91□□□□□ -0.18
HDDC2-204ENST00000608295 ZNF460Q14592 562 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 TRADDQ15628 312 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 TEDDM1Q5T9Z0 273 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 HECTD2Q5U5R9 776 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 MLIPQ5VWP3 458 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 STEAP4Q687X5 459 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 FRMPD2BQ6IN97 320 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 PAQR3Q6TCH7 311 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 PTRH1Q86Y79 214 aaKnown RBP13.91□□□□□ -0.18
HDDC2-204ENST00000608295 MCATQ8IVS2 390 aaKnown RBP13.91□□□□□ -0.18
HDDC2-204ENST00000608295 CNTN4Q8IWV2 1026 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 MYO1HQ8N1T3 1032 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 OR2A1Q8NGT9 310 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 GABPB2Q8TAK5 448 aaPredicted RBP13.91□□□□□ -0.18
HDDC2-204ENST00000608295 SELENOSQ9BQE4 189 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 ERP44Q9BS26 406 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 DPH7Q9BTV6 452 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 TRIM4Q9C037 500 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 ZNF71Q9NQZ8 489 aaPredicted RBP13.91□□□□□ -0.18
HDDC2-204ENST00000608295 INTS7Q9NVH2 962 aaKnown RBP13.91□□□□□ -0.18
HDDC2-204ENST00000608295 TAS2R13Q9NYV9 303 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 PLCL2Q9UPR0 1127 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 POLHQ9Y253 713 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 MRFAP1Q9Y605 127 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 COMMD10Q9Y6G5 202 aa13.91□□□□□ -0.18
HDDC2-204ENST00000608295 MDC1Q14676 2089 aaKnown RBP13.91□□□□□ -0.18
HDDC2-204ENST00000608295 ARGFXA6NJG6 315 aa13.9□□□□□ -0.18
HDDC2-204ENST00000608295 C21orf140B9A014 251 aa13.9□□□□□ -0.18
HDDC2-204ENST00000608295 C9J4A7 227 aa13.9□□□□□ -0.18
HDDC2-204ENST00000608295 MYO1CO00159 1063 aa13.9□□□□□ -0.18
HDDC2-204ENST00000608295 SMAPO00193 183 aa13.9□□□□□ -0.18
HDDC2-204ENST00000608295 PRICKLE3O43900 615 aaPredicted RBP13.9□□□□□ -0.18
HDDC2-204ENST00000608295 MPC1LP0DKB6 136 aa13.9□□□□□ -0.18
HDDC2-204ENST00000608295 ENO3P13929 434 aaPredicted RBP13.9□□□□□ -0.18
HDDC2-204ENST00000608295 CMPK1P30085 196 aa13.9□□□□□ -0.18
HDDC2-204ENST00000608295 SSTR1P30872 391 aa13.9□□□□□ -0.18
HDDC2-204ENST00000608295 OTX2P32243 289 aa13.9□□□□□ -0.18
HDDC2-204ENST00000608295 RGS4P49798 205 aa13.9□□□□□ -0.18
HDDC2-204ENST00000608295 MGAT5Q09328 741 aa13.9□□□□□ -0.18
HDDC2-204ENST00000608295 KCNAB2Q13303 367 aa13.9□□□□□ -0.18
HDDC2-204ENST00000608295 TTLL10Q6ZVT0 673 aa13.9□□□□□ -0.18
HDDC2-204ENST00000608295 STRA8Q7Z7C7 330 aa13.9□□□□□ -0.18
HDDC2-204ENST00000608295 PLD3Q8IV08 490 aa13.9□□□□□ -0.18
HDDC2-204ENST00000608295 ZNF480Q8WV37 535 aa13.9□□□□□ -0.18
HDDC2-204ENST00000608295 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.9□□□□□ -0.18
HDDC2-204ENST00000608295 SMPDL3AQ92484 453 aa13.9□□□□□ -0.18
HDDC2-204ENST00000608295 NDC1Q9BTX1 674 aa13.9□□□□□ -0.18
HDDC2-204ENST00000608295 UNKQ9C0B0 810 aaKnown RBP13.9□□□□□ -0.18
HDDC2-204ENST00000608295 SYTL2Q9HCH5 934 aa13.9□□□□□ -0.18
HDDC2-204ENST00000608295 MRPS30Q9NP92 439 aaKnown RBP13.9□□□□□ -0.18
HDDC2-204ENST00000608295 FARSAQ9Y285 508 aaKnown RBP13.9□□□□□ -0.18
HDDC2-204ENST00000608295 PCSK5Q92824 1860 aa13.9□□□□□ -0.18
HDDC2-204ENST00000608295 COL6A6A6NMZ7 2263 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 LOC105369274A0A096LPK9 316 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 LOC102723532A0A0G2JNH3 316 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 H3BMH7 237 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 TK2O00142 265 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 MSL3P1P0C860 447 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 IMPA1P29218 277 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 PLTPP55058 493 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 TBPL1P62380 186 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 CKAP4Q07065 602 aaKnown RBP13.89□□□□□ -0.19
HDDC2-204ENST00000608295 NCF4Q15080 339 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 CYP2A13Q16696 494 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 PHKG1Q16816 387 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 UGT3A1Q6NUS8 523 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 C8orf74Q6P047 294 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 CYHR1Q6ZMK1 362 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 MAATS1Q7Z4T9 603 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 OR4N4Q8N0Y3 316 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 PYROXD1Q8WU10 500 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 APOBEC4Q8WW27 367 aaKnown RBP13.89□□□□□ -0.19
HDDC2-204ENST00000608295 ASB11Q8WXH4 323 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 DLG3Q92796 817 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 LRRC39Q96DD0 335 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 CATSPER2Q96P56 530 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 ATG10Q9H0Y0 220 aa13.89□□□□□ -0.19
HDDC2-204ENST00000608295 SYNPO2LQ9H987 977 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms