RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 AOPEPQ8N6M6 819 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 C1orf52Q8N6N3 182 aaKnown RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 ATG16L2Q8NAA4 619 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 LEMD2Q8NC56 503 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 FAM156AQ8NDB6 213 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 CPEB3Q8NE35 698 aaKnown RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 MCUQ8NE86 351 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 ZFP28Q8NHY6 868 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 FIBINQ8TAL6 211 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 TSEN15Q8WW01 171 aaKnown RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 ZCCHC14Q8WYQ9 949 aaKnown RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 SNX19Q92543 992 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 RSC1A1Q92681 617 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 HTRA1Q92743 480 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 DIO2Q92813 273 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 ATOH1Q92858 354 aaPredicted RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 USP7Q93009 1102 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 EXOSC8Q96B26 276 aaKnown RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 PTCD3Q96EY7 689 aaKnown RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 ZNF764Q96H86 408 aaPredicted RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 BOD1Q96IK1 185 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 CASD1Q96PB1 797 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 ZBTB18Q99592 522 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 ECSITQ9BQ95 431 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 TUBB6Q9BUF5 446 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 TRAF4Q9BUZ4 470 aaPredicted RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 GTPBP2Q9BX10 602 aaKnown RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 BTBD1Q9H0C5 482 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 SPNS1Q9H2V7 528 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 SMYD3Q9H7B4 428 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 TLE6Q9H808 572 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 MRPL44Q9H9J2 332 aaKnown RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 NMRK2Q9NPI5 230 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 TLR9Q9NR96 1032 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 SDHAF2Q9NX18 166 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 SMPD3Q9NY59 655 aaPredicted RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 ARPP21Q9UBL0 812 aaPredicted RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 TRPC4Q9UBN4 977 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 DNAJB9Q9UBS3 223 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 TUBE1Q9UJT0 475 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 RPH3ALQ9UNE2 315 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 WASF3Q9UPY6 502 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 RNF24Q9Y225 148 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 LIPT1Q9Y234 373 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 TP53TG5Q9Y2B4 290 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 MTO1Q9Y2Z2 717 aaKnown RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 AAR2Q9Y312 384 aaKnown RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 SNX24Q9Y343 169 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 REXO2Q9Y3B8 237 aaKnown RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 PCDHGB1Q9Y5G3 927 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 ARAP1Q96P48 1450 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 NPHP4O75161 1426 aaPredicted RBP5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 TCRBV5S2A0A599 114 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 TRABD2BA6NFA1 517 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 E7ESA3 106 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 FAM86B1E9PN63 330 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 CDC7O00311 574 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 CYR61O00622 381 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 SMAD7O15105 426 aaKnown RBP5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 ADAMDEC1O15204 470 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 LRRTM2O43300 516 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 ARHGEF9O43307 516 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 BEST1O76090 585 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 GJB6O95452 261 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 MLYCDO95822 493 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 ONECUT2O95948 504 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 F9P00740 461 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 SLPIP03973 132 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 ERBB2P04626 1255 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 CTXN2P0C2S0 81 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 THRAP10827 490 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 ADRB3P13945 408 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 PTNP21246 168 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 CCNOP22674 350 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 ADRA1DP25100 572 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 CALML3P27482 149 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 CD40LGP29965 261 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 PRDX6P30041 224 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 PPP2R1BP30154 601 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 MSX2P35548 267 aaPredicted RBP5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 TMPOP42166 694 aaKnown RBP5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 DPP6P42658 865 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 MAGEA2P43356 314 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 CARSP49589 748 aaKnown RBP5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 AKR1D1P51857 326 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 AGFG1P52594 562 aaKnown RBP5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 ATP5IP56385 69 aaPredicted RBP5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 SOX8P57073 446 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 PSPHP78330 225 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 PEX6Q13608 980 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 IL18Q14116 193 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 ZNF169Q14929 603 aaPredicted RBP5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 SLC5A12Q1EHB4 618 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 PCGF3Q3KNV8 242 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 TCP11X2Q5H9J9 407 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 GLRA4Q5JXX5 417 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 EOGTQ5NDL2 527 aa5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 YOD1Q5VVQ6 348 aaPredicted RBP5.68□□□□□ -1.5
LSM1P2-201ENST00000604911 HACD4Q5VWC8 232 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms