RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 DNAJA1P31689 397 aaKnown RBP11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 EMP2P54851 167 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 GEMP55040 296 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 PPP2R2AP63151 447 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ALDH6A1Q02252 535 aaKnown RBP11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 DBN1Q16643 649 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 KRTCAP3Q53RY4 240 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 WASHC2DQ5SRD0 308 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 PRMT9Q6P2P2 845 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 FIGLAQ6QHK4 219 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 MFSD7Q6UXD7 560 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TGIF2LYQ8IUE0 185 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 PHF10Q8WUB8 498 aaKnown RBP11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 SYN2Q92777 582 aaPredicted RBP11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 HAUS1Q96CS2 278 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 DNAJC1Q96KC8 554 aaKnown RBP11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 IL17FQ96PD4 163 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 QKIQ96PU8 341 aaKnown RBP eCLIP11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 VAT1Q99536 393 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 GORASP1Q9BQQ3 440 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 GSX1Q9H4S2 264 aaPredicted RBP11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 KLHL1Q9NR64 748 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ENAMQ9NRM1 1142 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 INTS7Q9NVH2 962 aaKnown RBP11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 STMN3Q9NZ72 180 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 SMARCAL1Q9NZC9 954 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 CHMP5Q9NZZ3 219 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TNFRSF10DQ9UBN6 386 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TEKT2Q9UIF3 430 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 PPT2Q9UMR5 302 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 NENFQ9UMX5 172 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 FAM169AQ9Y6X4 670 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ZNF469Q96JG9 3925 aaPredicted RBP11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 IGLV3-12A0A075B6K2 115 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TMEM200CA6NKL6 621 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ADAM10O14672 748 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TTI1O43156 1089 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 CST8O60676 142 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ANXA9O76027 345 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 AP2A2O94973 939 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 S1PR4O95977 384 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 FTH1P02794 183 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 EIF2S1P05198 315 aaKnown RBP11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 HEXBP07686 556 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 H2AFZP0C0S5 128 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TNNT1P13805 278 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 CD9P21926 228 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ADRA1AP35348 466 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ARHGAP25P42331 645 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 IST1P53990 364 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 HSF1Q00613 529 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 DSG2Q14126 1118 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 SF1Q15637 639 aaKnown RBP11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 FIGNQ5HY92 759 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 FRMPD2BQ6IN97 320 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 RANBP10Q6VN20 620 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 H2AFVQ71UI9 128 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 PIANPQ8IYJ0 282 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 CHDHQ8NE62 594 aaPredicted RBP11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 SLC22A18Q96BI1 424 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 NAP1L5Q96NT1 182 aaPredicted RBP11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 DMRTA2Q96SC8 542 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 YIPF2Q9BWQ6 316 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 HES7Q9BYE0 225 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 GBA3Q9H227 469 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TRPC4Q9UBN4 977 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TRHDEQ9UKU6 1024 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 PRSS21Q9Y6M0 314 aa11.19□□□□□ -0.62
PDLIM1P1-201ENST00000604187 LOC105369274A0A096LPK9 316 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 LOC102723532A0A0G2JNH3 316 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 A0A1B0GTH6 734 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 SLC5A10A0PJK1 596 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 A8MUI8 341 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 E9PLN8 166 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 SRPX2O60687 465 aaPredicted RBP11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 SLCO2B1O94956 709 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 IGFBP2P18065 325 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 CDKN2BP42772 138 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 CSE1LP55060 971 aaKnown RBP11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 AP2B1P63010 937 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 MSLNQ13421 630 aaPredicted RBP11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TFDP2Q14188 446 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 PCOLCEQ15113 449 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 DNAJC21Q5F1R6 531 aaKnown RBP11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 LRRC38Q5VT99 294 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 KAZNQ674X7 775 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 FCRLBQ6BAA4 426 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 DOLPP1Q86YN1 238 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TMTC1Q8IUR5 882 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 OR4N4Q8N0Y3 316 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 BEST3Q8N1M1 668 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 DNAAF3Q8N9W5 541 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 P3H4Q92791 437 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 C10orf90Q96M02 699 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 FOXC2Q99958 501 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 VKORC1Q9BQB6 163 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TRIM51Q9BSJ1 452 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 MENTQ9BUN1 341 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ZNF700Q9H0M5 742 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 CXXC4Q9H2H0 198 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms