RNA–Protein interactions for RNA: ENST00000601194.1

PSMC4-205, Transcript of proteasome 26S subunit, ATPase 4, human

TSL 3

Gene PSMC4, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC4-205	ENST00000601194	TERT	O14746	1132 aa	Known RBP	13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	SLC16A5	O15375	505 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	MT-ND3	P03897	115 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	CTSB	P07858	339 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	CYP2A7	P20853	494 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	SAT1	P21673	171 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	IMPA1	P29218	277 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	GP5	P40197	560 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	GRIA3	P42263	894 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	YBX1	P67809	324 aa	Known RBP	13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	TAP2	Q03519	686 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	ZNF460	Q14592	562 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	PHKG1	Q16816	387 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	FCRL6	Q6DN72	434 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	FIGLA	Q6QHK4	219 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	SUSD1	Q6UWL2	747 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	RELL1	Q8IUW5	271 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	CEP97	Q8IW35	865 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	LRRC56	Q8IYG6	542 aa	Predicted RBP	13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	SYTL1	Q8IYJ3	562 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	PPFIBP2	Q8ND30	876 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	MCOLN3	Q8TDD5	553 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	FBF1	Q8TES7	1133 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	IFT81	Q8WYA0	676 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	KIAA1143	Q96AT1	154 aa	Predicted RBP	13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	PDLIM5	Q96HC4	596 aa	Known RBP	13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	SLC45A3	Q96JT2	553 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	FMO2	Q99518	471 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	RBBP8	Q99708	897 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	ACAT2	Q9BWD1	397 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	TXNDC16	Q9P2K2	825 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	MTRF1L	Q9UGC7	380 aa	Known RBP	13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	RALY	Q9UKM9	306 aa	Known RBP	13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	PADI1	Q9ULC6	663 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	PLCL2	Q9UPR0	1127 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	MTO1	Q9Y2Z2	717 aa	Known RBP	13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	CACNA1G	O43497	2377 aa		13.73	□□□□□ -0.21
PSMC4-205	ENST00000601194	SPTB	P11277	2137 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	SMG1	Q96Q15	3661 aa	Known RBP	13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	TARM1	B6A8C7	271 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194		E7EQ34	232 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	OR2B3	O76000	313 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	WISP3	O95389	354 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	CCNYL3	P0C7X3	344 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	F8A1	P23610	371 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	RPA3	P35244	121 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	RORA	P35398	523 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	POU4F1	Q01851	419 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	GPS2	Q13227	327 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	ZNF517	Q6ZMY9	492 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	MBOAT1	Q6ZNC8	495 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	CEP128	Q6ZU80	1094 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	MCAT	Q8IVS2	390 aa	Known RBP	13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	CTAGE3P	Q8IX95	158 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	GPR135	Q8IZ08	494 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	PPM1N	Q8N819	430 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	N4BP2L2	Q92802	583 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	ZUFSP	Q96AP4	578 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	CCDC138	Q96M89	665 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	LRFN5	Q96NI6	719 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	GPR22	Q99680	433 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	ACTR5	Q9H9F9	607 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	POPDC3	Q9HBV1	291 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	SLC6A20	Q9NP91	592 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	LHX9	Q9NQ69	397 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	EURL	Q9NYK6	297 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	NINJ2	Q9NZG7	142 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	STOX2	Q9P2F5	926 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	IL17B	Q9UHF5	180 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	CROT	Q9UKG9	612 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	IKZF3	Q9UKT9	509 aa		13.72	□□□□□ -0.21
PSMC4-205	ENST00000601194	IGKV1-8	A0A0C4DH67	115 aa		13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	OR2A25	A4D2G3	310 aa		13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	ZSCAN9	O15535	394 aa	Predicted RBP	13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	ZNF749	O43361	778 aa		13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	NRP2	O60462	931 aa		13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	CTSV	O60911	334 aa		13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	CMPK1	P30085	196 aa		13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	DLST	P36957	453 aa		13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	NAB1	Q13506	487 aa		13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	TSTA3	Q13630	321 aa	Predicted RBP	13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	NAA25	Q14CX7	972 aa		13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	UBAP2	Q5T6F2	1119 aa	Known RBP	13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	ICE2	Q659A1	982 aa		13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	SBSN	Q6UWP8	590 aa		13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	NKAP	Q8N5F7	415 aa	Known RBP	13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	ZSCAN1	Q8NBB4	408 aa		13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	LRRN4CL	Q8ND94	238 aa		13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	CT55	Q8WUE5	264 aa		13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	ANKRD49	Q8WVL7	239 aa		13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	ZNF285	Q96NJ3	590 aa		13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	DPH7	Q9BTV6	452 aa		13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	EFHD1	Q9BUP0	239 aa		13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	SPRTN	Q9H040	489 aa	Predicted RBP	13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	TSPYL1	Q9H0U9	437 aa		13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	L2HGDH	Q9H9P8	463 aa		13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	CAB39L	Q9H9S4	337 aa		13.71	□□□□□ -0.21
PSMC4-205	ENST00000601194	PCMTD2	Q9NV79	361 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms