RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 SLC13A5Q86YT5 568 aaPredicted RBP16.72■□□□□ 0.27
HOMER3-210ENST00000599097 ZNF285Q96NJ3 590 aa16.72■□□□□ 0.27
HOMER3-210ENST00000599097 TCF12Q99081 682 aa16.72■□□□□ 0.27
HOMER3-210ENST00000599097 SPSB2Q99619 263 aa16.72■□□□□ 0.27
HOMER3-210ENST00000599097 CRB3Q9BUF7 120 aa16.72■□□□□ 0.27
HOMER3-210ENST00000599097 MENTQ9BUN1 341 aa16.72■□□□□ 0.27
HOMER3-210ENST00000599097 ZNF304Q9HCX3 659 aa16.72■□□□□ 0.27
HOMER3-210ENST00000599097 ZNF282Q9UDV7 671 aaPredicted RBP16.72■□□□□ 0.27
HOMER3-210ENST00000599097 SPENQ96T58 3664 aaKnown RBP16.72■□□□□ 0.27
HOMER3-210ENST00000599097 ANKRD12Q6UB98 2062 aa16.71■□□□□ 0.27
HOMER3-210ENST00000599097 TCRBV7S2A1N4TA0A589 114 aa16.71■□□□□ 0.27
HOMER3-210ENST00000599097 A1L4Q6 167 aa16.71■□□□□ 0.27
HOMER3-210ENST00000599097 WIPF3A6NGB9 483 aa16.71■□□□□ 0.27
HOMER3-210ENST00000599097 MAP2K7O14733 419 aa16.71■□□□□ 0.27
HOMER3-210ENST00000599097 CNOT3O75175 753 aaKnown RBP16.71■□□□□ 0.27
HOMER3-210ENST00000599097 USP1O94782 785 aa16.71■□□□□ 0.27
HOMER3-210ENST00000599097 CCNDBP1O95273 360 aa16.71■□□□□ 0.27
HOMER3-210ENST00000599097 LDLRP01130 860 aa16.71■□□□□ 0.27
HOMER3-210ENST00000599097 ACPPP15309 386 aa16.71■□□□□ 0.27
HOMER3-210ENST00000599097 PAMP19021 973 aa16.71■□□□□ 0.27
HOMER3-210ENST00000599097 HSD17B2P37059 387 aa16.71■□□□□ 0.27
HOMER3-210ENST00000599097 EMP3P54852 163 aa16.71■□□□□ 0.27
HOMER3-210ENST00000599097 SARNPP82979 210 aaKnown RBP16.71■□□□□ 0.27
HOMER3-210ENST00000599097 ZNF169Q14929 603 aaPredicted RBP16.71■□□□□ 0.27
HOMER3-210ENST00000599097 IGFL2Q6UWQ7 119 aa16.71■□□□□ 0.27
HOMER3-210ENST00000599097 GSTA5Q7RTV2 222 aa16.71■□□□□ 0.27
HOMER3-210ENST00000599097 VRK3Q8IV63 474 aa16.71■□□□□ 0.27
HOMER3-210ENST00000599097 DNAJB14Q8TBM8 379 aa16.71■□□□□ 0.27
HOMER3-210ENST00000599097 C19orf60Q96EN9 201 aa16.71■□□□□ 0.27
HOMER3-210ENST00000599097 MVB12AQ96EY5 273 aa16.71■□□□□ 0.27
HOMER3-210ENST00000599097 BARD1Q99728 777 aaKnown RBP16.71■□□□□ 0.27
HOMER3-210ENST00000599097 NOVA2Q9UNW9 492 aaKnown RBP16.71■□□□□ 0.27
HOMER3-210ENST00000599097 CAPN6Q9Y6Q1 641 aa16.71■□□□□ 0.27
HOMER3-210ENST00000599097 HYKKA2RU49 373 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 TXNDC9O14530 226 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 SOCS6O14544 535 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 C1orf105O95561 183 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 HPP00738 406 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 UQCRHP07919 91 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 CXCR2P25025 360 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 GRIA3P42263 894 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 VSX2P58304 361 aaPredicted RBP16.7■□□□□ 0.26
HOMER3-210ENST00000599097 BASP1P80723 227 aaKnown RBP16.7■□□□□ 0.26
HOMER3-210ENST00000599097 CDC16Q13042 620 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 GRB7Q14451 532 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 ARHGAP19Q14CB8 494 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 CCNG2Q16589 344 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 WASHC2DQ5SRD0 308 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 DRICH1Q6PGQ1 229 aaPredicted RBP16.7■□□□□ 0.26
HOMER3-210ENST00000599097 FAM180AQ6UWF9 173 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 ISLR2Q6UXK2 745 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 CUZD1Q86UP6 607 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 LURAP1LQ8IV03 231 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 OR2L3Q8NG85 312 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 C1orf54Q8WWF1 131 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 MIEF2Q96C03 454 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 ZNF778Q96MU6 729 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 IL17FQ96PD4 163 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 ZFYVE21Q9BQ24 234 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 DESI2Q9BSY9 194 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 P2RY12Q9H244 342 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 CHRAC1Q9NRG0 131 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 SLC22A11Q9NSA0 550 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 HOMER3Q9NSC5 361 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 C14orf105Q9NVL8 296 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 ERRFI1Q9UJM3 462 aaPredicted RBP16.7■□□□□ 0.26
HOMER3-210ENST00000599097 KLHL20Q9Y2M5 609 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 HS3ST3B1Q9Y662 390 aa16.7■□□□□ 0.26
HOMER3-210ENST00000599097 SNRNP200O75643 2136 aaKnown RBP16.69■□□□□ 0.26
HOMER3-210ENST00000599097 DYTNA2CJ06 578 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 ENO4A6NNW6 628 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 IQCF5A8MTL0 148 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 ESR1P03372 595 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 CTSBP07858 339 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 MYBL2P10244 700 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 EDN3P14138 238 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 PKMP14618 531 aaKnown RBP16.69■□□□□ 0.26
HOMER3-210ENST00000599097 FBLP22087 321 aaKnown RBP16.69■□□□□ 0.26
HOMER3-210ENST00000599097 CDC25BP30305 580 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 GRIA1P42261 906 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 ADARP55265 1226 aaKnown RBP16.69■□□□□ 0.26
HOMER3-210ENST00000599097 EIF3BP55884 814 aaKnown RBP16.69■□□□□ 0.26
HOMER3-210ENST00000599097 SESN2P58004 480 aaPredicted RBP16.69■□□□□ 0.26
HOMER3-210ENST00000599097 SEMA3AQ14563 771 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 RPS6KA1Q15418 735 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 INAQ16352 499 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 ANKRD20A4Q4UJ75 823 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 KIRREL2Q6UWL6 708 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 RNF44Q7L0R7 432 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 SLC34A3Q8N130 599 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 KRT222Q8N1A0 295 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 C2orf73Q8N5S3 287 aaPredicted RBP16.69■□□□□ 0.26
HOMER3-210ENST00000599097 SMPDL3AQ92484 453 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 THOC3Q96J01 351 aaKnown RBP16.69■□□□□ 0.26
HOMER3-210ENST00000599097 CNDP1Q96KN2 507 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 LMF1Q96S06 567 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 MIPEPQ99797 713 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 SOX17Q9H6I2 414 aaPredicted RBP16.69■□□□□ 0.26
HOMER3-210ENST00000599097 TREX1Q9NSU2 369 aa16.69■□□□□ 0.26
HOMER3-210ENST00000599097 CTSFQ9UBX1 484 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms