RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 WISP1O95388 367 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 ERVK-10P10266 1014 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 ALAS2P22557 587 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 CASRP41180 1078 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 PAFAH1B1P43034 410 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 CSRP3P50461 194 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 RELAQ04206 551 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 DHX9Q08211 1270 aaKnown RBP10.09□□□□□ -0.79
CCDC9-203ENST00000596938 CBLBQ13191 982 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 FASTKQ14296 549 aaKnown RBP10.09□□□□□ -0.79
CCDC9-203ENST00000596938 GRM7Q14831 915 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 FAM214AQ32MH5 1076 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 NKAIN1Q4KMZ8 207 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 MSS51Q4VC12 460 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.09□□□□□ -0.79
CCDC9-203ENST00000596938 C1orf189Q5VU69 101 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 MLIPQ5VWP3 458 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 UGT3A1Q6NUS8 523 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 MRPL14Q6P1L8 145 aaKnown RBP10.09□□□□□ -0.79
CCDC9-203ENST00000596938 FBXO42Q6P3S6 717 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 KIAA0408Q6ZU52 694 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 MED25Q71SY5 747 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 GALNT7Q86SF2 657 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 TAX1BP1Q86VP1 789 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 KCNMB4Q86W47 210 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 IGDCC3Q8IVU1 814 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 CNTN4Q8IWV2 1026 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 PDIK1LQ8N165 341 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 TMEM102Q8N9M5 508 aaPredicted RBP10.09□□□□□ -0.79
CCDC9-203ENST00000596938 GIMAP7Q8NHV1 300 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 NACC2Q96BF6 587 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 PTERQ96BW5 349 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 LRRC39Q96DD0 335 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 CAPZA3Q96KX2 299 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 IP6K3Q96PC2 410 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 PKP4Q99569 1192 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 GPR21Q99679 349 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 MIPEPQ99797 713 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 AARSD1Q9BTE6 412 aaKnown RBP10.09□□□□□ -0.79
CCDC9-203ENST00000596938 TRIM55Q9BYV6 548 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 IARS2Q9NSE4 1012 aaKnown RBP10.09□□□□□ -0.79
CCDC9-203ENST00000596938 TXLNGQ9NUQ3 528 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 IRAK4Q9NWZ3 460 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 IFT80Q9P2H3 777 aaPredicted RBP10.09□□□□□ -0.79
CCDC9-203ENST00000596938 DHCR7Q9UBM7 475 aaKnown RBP10.09□□□□□ -0.79
CCDC9-203ENST00000596938 GPN3Q9UHW5 284 aaPredicted RBP10.09□□□□□ -0.79
CCDC9-203ENST00000596938 PYCARDQ9ULZ3 195 aa10.09□□□□□ -0.79
CCDC9-203ENST00000596938 PCDHGA9Q9Y5G4 932 aaKnown RBP10.09□□□□□ -0.79
CCDC9-203ENST00000596938 A0A1B0GX78 115 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 OR2A25A4D2G3 310 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 KRT87PA6NCN2 255 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 ARGFXA6NJG6 315 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 K7EM74 188 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 DSCR3O14972 297 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 VPS26AO75436 327 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 CEACAM4O75871 244 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 SLC16A8O95907 504 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 AHSGP02765 367 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 ALBP02768 609 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 PIM1P11309 404 aaPredicted RBP10.08□□□□□ -0.8
CCDC9-203ENST00000596938 PSMB5P28074 263 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 GABRB3P28472 473 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 CMPK1P30085 196 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 RPA3P35244 121 aaPredicted RBP10.08□□□□□ -0.8
CCDC9-203ENST00000596938 CCL11P51671 97 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 PNLIPRP1P54315 467 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 MPP1Q00013 466 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 TIAL1Q01085 375 aaKnown RBP eCLIP10.08□□□□□ -0.8
CCDC9-203ENST00000596938 KCNC4Q03721 635 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 PRDX1Q06830 199 aaKnown RBP10.08□□□□□ -0.8
CCDC9-203ENST00000596938 KLRB1Q12918 225 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 FRG1Q14331 258 aaKnown RBP10.08□□□□□ -0.8
CCDC9-203ENST00000596938 BBS9Q3SYG4 887 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 WASHC2DQ5SRD0 308 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 TEDDM1Q5T9Z0 273 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 FAM69BQ5VUD6 431 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 LRRC8EQ6NSJ5 796 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 HIBCHQ6NVY1 386 aaPredicted RBP10.08□□□□□ -0.8
CCDC9-203ENST00000596938 TTLL10Q6ZVT0 673 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 ASB18Q6ZVZ8 466 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 OVCH1Q7RTY7 1134 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 KLHL7Q8IXQ5 586 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 OR2Y1Q8NGV0 311 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 CD200R1Q8TD46 325 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 ZNF480Q8WV37 535 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 SELENOSQ9BQE4 189 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 DPH7Q9BTV6 452 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 SLC26A1Q9H2B4 701 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 ACSS2Q9NR19 701 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 SLC22A11Q9NSA0 550 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 CUTCQ9NTM9 273 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 ANKMY1Q9P2S6 941 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 NDOR1Q9UHB4 597 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 TP53TG5Q9Y2B4 290 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 PCDHGB7Q9Y5F8 929 aa10.08□□□□□ -0.8
CCDC9-203ENST00000596938 E7ENX8 843 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 TP73O15350 636 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 BANF1O75531 89 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 DNAJB5O75953 348 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 IGHEP01854 428 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms