RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 CD82P27701 267 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 CMPK1P30085 196 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 GMPRP36959 345 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 ATP1A2P50993 1020 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 YBX1P67809 324 aaKnown RBP10.68□□□□□ -0.7
LIG1-211ENST00000596457 TUBB4BP68371 445 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 SRSF6Q13247 344 aaKnown RBP10.68□□□□□ -0.7
LIG1-211ENST00000596457 CLN3Q13286 438 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 NAB1Q13506 487 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 BMPR2Q13873 1038 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 IL11RAQ14626 422 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 ZIC1Q15915 447 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 CYP2A13Q16696 494 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 MANEAQ5SRI9 462 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 KIAA1614Q5VZ46 1190 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 FIGLAQ6QHK4 219 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 CDHR3Q6ZTQ4 885 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 VASH2Q86V25 355 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 CARFQ8N187 725 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 IL22RA1Q8N6P7 574 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 GALNT6Q8NCL4 622 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 ZNF480Q8WV37 535 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 ANKRD49Q8WVL7 239 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 SMPDL3AQ92484 453 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 DLG3Q92796 817 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 ZNF501Q96CX3 271 aaPredicted RBP10.68□□□□□ -0.7
LIG1-211ENST00000596457 MED8Q96G25 268 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 TCTN2Q96GX1 697 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 CCDC138Q96M89 665 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 GPR22Q99680 433 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 ZPBPQ9BS86 351 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 TRIM54Q9BYV2 358 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 PITPNM3Q9BZ71 974 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 ATG10Q9H0Y0 220 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 FAM60AQ9NP50 221 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 INTS7Q9NVH2 962 aaKnown RBP10.68□□□□□ -0.7
LIG1-211ENST00000596457 IKZF3Q9UKT9 509 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 BTRCQ9Y297 605 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 PCDHGA3Q9Y5H0 932 aa10.68□□□□□ -0.7
LIG1-211ENST00000596457 A0A087WUV0 522 aaPredicted RBP10.67□□□□□ -0.7
LIG1-211ENST00000596457 A0A1W2PPV9 198 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 TK2O00142 265 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 SLC16A5O15375 505 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 PRICKLE3O43900 615 aaPredicted RBP10.67□□□□□ -0.7
LIG1-211ENST00000596457 SCRG1O75711 98 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 SLU7O95391 586 aaKnown RBP10.67□□□□□ -0.7
LIG1-211ENST00000596457 TIAF1O95411 115 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 TSPAN12O95859 305 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 CCDC166P0CW27 439 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 ZNF37AP17032 561 aaPredicted RBP10.67□□□□□ -0.7
LIG1-211ENST00000596457 IMPA1P29218 277 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 HSD17B2P37059 387 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 PMS2P54278 862 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 ILF2Q12905 390 aaKnown RBP10.67□□□□□ -0.7
LIG1-211ENST00000596457 SP140Q13342 867 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 PHKG1Q16816 387 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 MROH9Q5TGP6 573 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 PRAMEF17Q5VTA0 474 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 FCRL6Q6DN72 434 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 PWWP2BQ6NUJ5 590 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 C6orf15Q6UXA7 325 aaPredicted RBP10.67□□□□□ -0.7
LIG1-211ENST00000596457 FRA10AC1Q70Z53 315 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 TIPARPQ7Z3E1 657 aaKnown RBP10.67□□□□□ -0.7
LIG1-211ENST00000596457 ADCK2Q7Z695 626 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 CMC1Q7Z7K0 106 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 RELL1Q8IUW5 271 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 CACNA2D3Q8IZS8 1091 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 NLGN4XQ8N0W4 816 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 FBXO15Q8NCQ5 510 aaPredicted RBP10.67□□□□□ -0.7
LIG1-211ENST00000596457 NLGN4YQ8NFZ3 816 aaPredicted RBP10.67□□□□□ -0.7
LIG1-211ENST00000596457 OR2A1Q8NGT9 310 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 OR1L3Q8NH93 324 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 CRELD1Q96HD1 420 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 UBL7Q96S82 380 aaPredicted RBP10.67□□□□□ -0.7
LIG1-211ENST00000596457 EGFL8Q99944 293 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 MCMBPQ9BTE3 642 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 SLC12A9Q9BXP2 914 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 B3GNT4Q9C0J1 378 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 SPRTNQ9H040 489 aaPredicted RBP10.67□□□□□ -0.7
LIG1-211ENST00000596457 PRORYQ9H606 182 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 MRPS30Q9NP92 439 aaKnown RBP10.67□□□□□ -0.7
LIG1-211ENST00000596457 ARL15Q9NXU5 204 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 STOX2Q9P2F5 926 aaPredicted RBP10.67□□□□□ -0.7
LIG1-211ENST00000596457 CTNNAL1Q9UBT7 734 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.67□□□□□ -0.7
LIG1-211ENST00000596457 TAC3Q9UHF0 121 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 SERTAD3Q9UJW9 196 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 IKBKGQ9Y6K9 419 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 V9GYY5 206 aaPredicted RBP10.67□□□□□ -0.7
LIG1-211ENST00000596457 FREM2Q5SZK8 3169 aa10.67□□□□□ -0.7
LIG1-211ENST00000596457 NCF1BA6NI72 391 aaPredicted RBP10.66□□□□□ -0.7
LIG1-211ENST00000596457 NCF1CA8MVU1 366 aaPredicted RBP10.66□□□□□ -0.7
LIG1-211ENST00000596457 E7ENX8 843 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 HCRTR1O43613 425 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 INHBAP08476 426 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 CCNYL3P0C7X3 344 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 MYBL2P10244 700 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 NCF1P14598 390 aaPredicted RBP10.66□□□□□ -0.7
LIG1-211ENST00000596457 MSH2P43246 934 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 RAB10P61026 200 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms