RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 TRAV17A0A0B4J275 112 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 DYTNA2CJ06 578 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 HYKKA2RU49 373 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 RCCD1A6NED2 376 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 IQCF5A8MTL0 148 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 MAP2K7O14733 419 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 NRP2O60462 931 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 SLCO2B1O94956 709 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 GOT2P00505 430 aaKnown RBP9.51□□□□□ -0.89
LIG1-209ENST00000596104 RPN2P04844 631 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 PRR35P0CG20 571 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 COX6A1P12074 109 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 FDXRP22570 491 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 PSMB5P28074 263 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 PTGER4P35408 488 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 GDF10P55107 478 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 RWDD2BP57060 319 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 VSX2P58304 361 aaPredicted RBP9.51□□□□□ -0.89
LIG1-209ENST00000596104 ARG2P78540 354 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 ACVR1Q04771 509 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 SEMA3AQ14563 771 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 FRMPD2BQ6IN97 320 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 PRMT9Q6P2P2 845 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 AFTPHQ6ULP2 937 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 BNC2Q6ZN30 1099 aaPredicted RBP9.51□□□□□ -0.89
LIG1-209ENST00000596104 KBTBD2Q8IY47 623 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 PRSS58Q8IYP2 241 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 OR52K1Q8NGK4 314 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 CFAP61Q8NHU2 1237 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 BRIX1Q8TDN6 353 aaKnown RBP9.51□□□□□ -0.89
LIG1-209ENST00000596104 ASZ1Q8WWH4 475 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 HAS2Q92819 552 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 ZUFSPQ96AP4 578 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 MIEF2Q96C03 454 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 CCDC120Q96HB5 630 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 MAGEB10Q96LZ2 347 aaPredicted RBP9.51□□□□□ -0.89
LIG1-209ENST00000596104 C10orf90Q96M02 699 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 ZNF778Q96MU6 729 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 ALS2CR12Q96Q35 445 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 CARD6Q9BX69 1037 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 ZNF304Q9HCX3 659 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 PLA2G3Q9NZ20 509 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 PTGFRNQ9P2B2 879 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 ZNF282Q9UDV7 671 aaPredicted RBP9.51□□□□□ -0.89
LIG1-209ENST00000596104 SLC2A6Q9UGQ3 507 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 RIMKLBQ9ULI2 386 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 C2CD3Q4AC94 2353 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 ANKRD12Q6UB98 2062 aa9.51□□□□□ -0.89
LIG1-209ENST00000596104 CCDC88CQ9P219 2028 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 LOC105369274A0A096LPK9 316 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 NSG1A0A0A6YYJ2 146 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 LOC102723532A0A0G2JNH3 316 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 A0A1W2PPV9 198 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 OR2A25A4D2G3 310 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 KRT87PA6NCN2 255 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 F8W8V4 182 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 PSMD3O43242 534 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 SERPINA7P05543 415 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 MST1P26927 711 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 AOAHP28039 575 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 CA7P43166 264 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 YBX1P67809 324 aaKnown RBP9.5□□□□□ -0.89
LIG1-209ENST00000596104 OCA2Q04671 838 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 ZNF630Q2M218 657 aaPredicted RBP9.5□□□□□ -0.89
LIG1-209ENST00000596104 ZXDCQ2QGD7 858 aaPredicted RBP9.5□□□□□ -0.89
LIG1-209ENST00000596104 PRTGQ2VWP7 1150 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 P3H1Q32P28 736 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 CCSMST1Q4G0I0 132 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 VWA2Q5GFL6 755 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 TSTD2Q5T7W7 516 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 GFRALQ6UXV0 394 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 RNF44Q7L0R7 432 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 NDUFAF7Q7L592 441 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 GDF7Q7Z4P5 450 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 MRGPRGQ86SM5 289 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 LAPTM4BQ86VI4 370 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 OR4N4Q8N0Y3 316 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 KRT222Q8N1A0 295 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 ZNF808Q8N4W9 903 aaPredicted RBP9.5□□□□□ -0.89
LIG1-209ENST00000596104 SIRT6Q8N6T7 355 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 TC2NQ8N9U0 490 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 OR2L3Q8NG85 312 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 OR2A1Q8NGT9 310 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 SLC35B2Q8TB61 432 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 HMGCLL1Q8TB92 370 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 LURAP1Q96LR2 239 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 MIPEPQ99797 713 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 RAB11FIP5Q9BXF6 653 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 ABI3Q9P2A4 366 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 STOX2Q9P2F5 926 aaPredicted RBP9.5□□□□□ -0.89
LIG1-209ENST00000596104 ZC3H7BQ9UGR2 993 aaKnown RBP9.5□□□□□ -0.89
LIG1-209ENST00000596104 SLC39A10Q9ULF5 831 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 R3HDM2Q9Y2K5 976 aaKnown RBP9.5□□□□□ -0.89
LIG1-209ENST00000596104 MRPS2Q9Y399 296 aaKnown RBP9.5□□□□□ -0.89
LIG1-209ENST00000596104 FAM169AQ9Y6X4 670 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 DOCK10Q96BY6 2186 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 SVILO95425 2214 aa9.5□□□□□ -0.89
LIG1-209ENST00000596104 LOC102723996A0A087X1L8 192 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 IGHV1-45A0A0A0MS14 117 aa9.49□□□□□ -0.89
LIG1-209ENST00000596104 TRGV8A0A0C4DH27 118 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms