RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CCDC81Q6ZN84 652 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 EIF3MQ7L2H7 374 aaKnown RBP12.9□□□□□ -0.34
VRK3-209ENST00000594948 GALNT5Q7Z7M9 940 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 SLC22A16Q86VW1 577 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 C10orf111Q8N326 155 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 TCAIMQ8N3R3 496 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 NAT16Q8N8M0 369 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 MCFD2Q8NI22 146 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 STARD8Q92502 1023 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 NELL1Q92832 810 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 HPS1Q92902 700 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 ZHX1-C8orf76Q96EF9 292 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 FCRL1Q96LA6 429 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 MAGEB10Q96LZ2 347 aaPredicted RBP12.9□□□□□ -0.34
VRK3-209ENST00000594948 GABARAPL3Q9BY60 117 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 ALOXE3Q9BYJ1 711 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 ACPTQ9BZG2 426 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 SLC32A1Q9H598 525 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 AASDHPPTQ9NRN7 309 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 SNX6Q9UNH7 406 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 ABCG2Q9UNQ0 655 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 METTL15A6NJ78 407 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 CBX4O00257 560 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 GAPDHSO14556 408 aaPredicted RBP12.89□□□□□ -0.35
VRK3-209ENST00000594948 SLC25A14O95258 325 aaPredicted RBP12.89□□□□□ -0.35
VRK3-209ENST00000594948 FADS2O95864 444 aaKnown RBP12.89□□□□□ -0.35
VRK3-209ENST00000594948 ANXA5P08758 320 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 PABPC1P11940 636 aaKnown RBP12.89□□□□□ -0.35
VRK3-209ENST00000594948 MYCLP1P12525 358 aaPredicted RBP12.89□□□□□ -0.35
VRK3-209ENST00000594948 CD36P16671 472 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 FUT4P22083 530 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 FSHRP23945 695 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 PXNP49023 591 aaPredicted RBP12.89□□□□□ -0.35
VRK3-209ENST00000594948 ALDH7A1P49419 539 aaKnown RBP12.89□□□□□ -0.35
VRK3-209ENST00000594948 CD300CQ08708 224 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 GTF2H3Q13889 308 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 VMACQ2NL98 169 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 DEPDC1Q5TB30 811 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 RNF219Q5W0B1 726 aaPredicted RBP12.89□□□□□ -0.35
VRK3-209ENST00000594948 SLC24A5Q71RS6 500 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 CBLL1Q75N03 491 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 LRRC70Q7Z2Q7 622 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 PAGE2Q7Z2X7 111 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 HORMAD1Q86X24 394 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 ZZZ3Q8IYH5 903 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 LKAAEAR1Q8TD35 194 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 FAM193BQ96PV7 902 aaPredicted RBP12.89□□□□□ -0.35
VRK3-209ENST00000594948 EPYCQ99645 322 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 BARD1Q99728 777 aaKnown RBP12.89□□□□□ -0.35
VRK3-209ENST00000594948 INPP5KQ9BT40 448 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 HTATIP2Q9BUP3 242 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 APOL5Q9BWW9 433 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 CEP44Q9C0F1 390 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 NXF2Q9GZY0 626 aaKnown RBP12.89□□□□□ -0.35
VRK3-209ENST00000594948 KRT84Q9NSB2 600 aa12.89□□□□□ -0.35
VRK3-209ENST00000594948 PDP1Q9P0J1 537 aaPredicted RBP12.89□□□□□ -0.35
VRK3-209ENST00000594948 EFCAB9A8MZ26 197 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 RFXANKO14593 260 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 VNN2O95498 520 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 PRAMEF1O95521 474 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 ZNF682O95780 498 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 PDYNP01213 254 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 GPX2P18283 190 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 ACRV1P26436 265 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 KDELR2P33947 212 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 KRT20P35900 424 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 AP1S1P61966 158 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 ZNF33BQ06732 778 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 VEZF1Q14119 521 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 TBCEQ15813 527 aaPredicted RBP12.88□□□□□ -0.35
VRK3-209ENST00000594948 DUOXA1Q1HG43 343 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 ZNF404Q494X3 552 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 GPR33Q49SQ1 333 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 ARMC12Q5T9G4 340 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 CXorf57Q6NSI4 855 aaKnown RBP12.88□□□□□ -0.35
VRK3-209ENST00000594948 DOK6Q6PKX4 331 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 ZNF551Q7Z340 670 aaPredicted RBP12.88□□□□□ -0.35
VRK3-209ENST00000594948 GPR155Q7Z3F1 870 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 LYSMD2Q8IV50 215 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 EID2BQ96D98 161 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 MYO19Q96H55 970 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 SEPT5Q99719 369 aaPredicted RBP12.88□□□□□ -0.35
VRK3-209ENST00000594948 CTRCQ99895 268 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 CORO1BQ9BR76 489 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 HERC2P3Q9BVR0 1158 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 KLHL25Q9H0H3 589 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 DCSTAMPQ9H295 470 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 PPT2Q9UMR5 302 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 ERVK-11Q9UQG0 969 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 DLGAP4Q9Y2H0 992 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 FNDC3AQ9Y2H6 1198 aaKnown RBP12.88□□□□□ -0.35
VRK3-209ENST00000594948 PRG3Q9Y2Y8 225 aaPredicted RBP12.88□□□□□ -0.35
VRK3-209ENST00000594948 KCNE1BA0A087WTH5 132 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 PABPN1LA6NDY0 278 aaKnown RBP12.88□□□□□ -0.35
VRK3-209ENST00000594948 MAN1A2O60476 641 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 WBP4O75554 376 aaKnown RBP12.88□□□□□ -0.35
VRK3-209ENST00000594948 MYO1DO94832 1006 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 PGLSO95336 258 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 PTTG1O95997 202 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 C9P02748 559 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms