RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 CCDC183Q5T5S1 534 aa4.7□□□□□ -1.66
SMAD4-216ENST00000593223 NSUN5P2Q63ZY6 315 aa4.7□□□□□ -1.66
SMAD4-216ENST00000593223 KIAA0930Q6ICG6 404 aaPredicted RBP4.7□□□□□ -1.66
SMAD4-216ENST00000593223 OLFM4Q6UX06 510 aa4.7□□□□□ -1.66
SMAD4-216ENST00000593223 FOXL2NBQ6ZUU3 175 aa4.7□□□□□ -1.66
SMAD4-216ENST00000593223 ASB18Q6ZVZ8 466 aa4.7□□□□□ -1.66
SMAD4-216ENST00000593223 PIWIL3Q7Z3Z3 882 aaKnown RBP4.7□□□□□ -1.66
SMAD4-216ENST00000593223 SZRD1Q7Z422 152 aa4.7□□□□□ -1.66
SMAD4-216ENST00000593223 METTL27Q8N6F8 245 aaPredicted RBP4.7□□□□□ -1.66
SMAD4-216ENST00000593223 EMC1Q8N766 993 aa4.7□□□□□ -1.66
SMAD4-216ENST00000593223 PPP4R1Q8TF05 950 aa4.7□□□□□ -1.66
SMAD4-216ENST00000593223 KRT35Q92764 455 aa4.7□□□□□ -1.66
SMAD4-216ENST00000593223 FAM162AQ96A26 154 aa4.7□□□□□ -1.66
SMAD4-216ENST00000593223 THAP9Q9H5L6 903 aa4.7□□□□□ -1.66
SMAD4-216ENST00000593223 FKRPQ9H9S5 495 aa4.7□□□□□ -1.66
SMAD4-216ENST00000593223 TAS2R3Q9NYW6 316 aa4.7□□□□□ -1.66
SMAD4-216ENST00000593223 OGFRQ9NZT2 677 aa4.7□□□□□ -1.66
SMAD4-216ENST00000593223 ACTR3BQ9P1U1 418 aa4.7□□□□□ -1.66
SMAD4-216ENST00000593223 MUC3AQ02505 3323 aa4.7□□□□□ -1.66
SMAD4-216ENST00000593223 LY75O60449 1722 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 NSD2O96028 1365 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 A0A0U1RQK1 487 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 ZNF320A2RRD8 509 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 A8MXE2 369 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 RIPK2O43353 540 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 XPNPEP2O43895 674 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 TBX10O75333 385 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 DDHD2O94830 711 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 CRYAAP02489 173 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 FAM106CPP0CH98 169 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 HSPA5P11021 654 aaKnown RBP4.69□□□□□ -1.66
SMAD4-216ENST00000593223 TOP1P11387 765 aaKnown RBP4.69□□□□□ -1.66
SMAD4-216ENST00000593223 NR2F2P24468 414 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 ACSL1P33121 698 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 STARD6P59095 220 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 MECOMQ03112 1051 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 ACTN3Q08043 901 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-216ENST00000593223 LASP1Q14847 261 aaKnown RBP4.69□□□□□ -1.66
SMAD4-216ENST00000593223 SYCP1Q15431 976 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 ZRSR1Q15695 479 aaKnown RBP4.69□□□□□ -1.66
SMAD4-216ENST00000593223 ASTE1Q2TB18 679 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-216ENST00000593223 ACCSLQ4AC99 568 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 STXBP5Q5T5C0 1151 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 JADE1Q6IE81 842 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 FAM171BQ6P995 826 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 PET117Q6UWS5 81 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 RAD9BQ6WBX8 426 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 ZNF704Q6ZNC4 412 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-216ENST00000593223 KCTD8Q6ZWB6 473 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 CCDC186Q7Z3E2 898 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 DSG4Q86SJ6 1040 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 ADCK1Q86TW2 530 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 METTL23Q86XA0 190 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 RASGEF1CQ8N431 466 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 KBTBD3Q8NAB2 608 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 DMBX1Q8NFW5 382 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 TMEM255BQ8WV15 326 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 PGAM5Q96HS1 289 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 COG3Q96JB2 828 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 AK8Q96MA6 479 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 GBP5Q96PP8 586 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 OR2A14Q96R47 310 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 LZTS2Q9BRK4 669 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 MID1IP1Q9NPA3 183 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 KLHL1Q9NR64 748 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 TCP11L1Q9NUJ3 509 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 EXOC1Q9NV70 894 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 FBXL17Q9UF56 701 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 DBNLQ9UJU6 430 aaKnown RBP4.69□□□□□ -1.66
SMAD4-216ENST00000593223 ANAPC5Q9UJX4 755 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 ZNF215Q9UL58 517 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-216ENST00000593223 CCL27Q9Y4X3 112 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 MYOM3Q5VTT5 1437 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 UNC79Q9P2D8 2635 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 TIAM2Q8IVF5 1701 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 PIEZO1Q92508 2521 aa4.69□□□□□ -1.66
SMAD4-216ENST00000593223 LAMA3Q16787 3333 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 LINC00854A0A1B0GVQ3 168 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 A0A1W2PS18 150 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 CTAGE9A4FU28 777 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 PGRMC2O15173 223 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 VILLO15195 856 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 SMAD9O15198 467 aaKnown RBP4.68□□□□□ -1.66
SMAD4-216ENST00000593223 WDR46O15213 610 aaKnown RBP4.68□□□□□ -1.66
SMAD4-216ENST00000593223 POLR3GO15318 223 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-216ENST00000593223 PLPP2O43688 288 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 LMX1BO60663 402 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 RTN2O75298 545 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 SP100P23497 879 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-216ENST00000593223 GP5P40197 560 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 PSMB10P40306 273 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 GPR143P51810 404 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 ARFIP1P53367 373 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 SLC12A3P55017 1021 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 TRADDQ15628 312 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 SMU1Q2TAY7 513 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 HSP90AA5PQ58FG0 334 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 PDSS1Q5T2R2 415 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 TMEM198Q66K66 360 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms