RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 CBSP35520 551 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 HSD17B2P37059 387 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 RGS4P49798 205 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 PNLIPRP1P54315 467 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 POLE2P56282 527 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 RBM20Q5T481 1227 aaKnown RBP11.61□□□□□ -0.55
TPM4-212ENST00000590180 TRMT10BQ6PF06 316 aaKnown RBP11.61□□□□□ -0.55
TPM4-212ENST00000590180 PAQR3Q6TCH7 311 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 SUSD1Q6UWL2 747 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 UBE2R2Q712K3 238 aaPredicted RBP11.61□□□□□ -0.55
TPM4-212ENST00000590180 PIWIL4Q7Z3Z4 852 aaKnown RBP11.61□□□□□ -0.55
TPM4-212ENST00000590180 ENDOVQ8N8Q3 282 aaKnown RBP11.61□□□□□ -0.55
TPM4-212ENST00000590180 GPATCH11Q8N954 259 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 FBXO36Q8NEA4 188 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 OR2A1Q8NGT9 310 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 HMGCLL1Q8TB92 370 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 EEF1AKMT1Q8WVE0 214 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 SEC14L1Q92503 715 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 NLNQ9BYT8 704 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 SLC17A6Q9P2U8 582 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 NDOR1Q9UHB4 597 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 GPN3Q9UHW5 284 aaPredicted RBP11.61□□□□□ -0.55
TPM4-212ENST00000590180 SNX7Q9UNH6 387 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 VWA7Q9Y334 891 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 TLN1Q9Y490 2541 aaKnown RBP11.61□□□□□ -0.55
TPM4-212ENST00000590180 A0A0J9YVX5 310 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 A0A1W2PPV9 198 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 B8ZZF3 427 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 GFYI3L273 518 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 MYO1CO00159 1063 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 RAB40ALP0C0E4 278 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 SAT1P21673 171 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 CDKN2DP55273 166 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 VSX2P58304 361 aaPredicted RBP11.6□□□□□ -0.55
TPM4-212ENST00000590180 YBX1P67809 324 aaKnown RBP11.6□□□□□ -0.55
TPM4-212ENST00000590180 DCDP81605 110 aaKnown RBP11.6□□□□□ -0.55
TPM4-212ENST00000590180 MGAT5Q09328 741 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 KCNAB2Q13303 367 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 ARHGAP19Q14CB8 494 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 THEMIS2Q5TEJ8 643 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 ZNF517Q6ZMY9 492 aaPredicted RBP11.6□□□□□ -0.55
TPM4-212ENST00000590180 SYVN1Q86TM6 617 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 CNTN4Q8IWV2 1026 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 ZBED8Q8IZ13 594 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 PPFIBP2Q8ND30 876 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 OR2L3Q8NG85 312 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 MCOLN3Q8TDD5 553 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 PYROXD1Q8WU10 500 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 DPH2Q9BQC3 489 aaPredicted RBP11.6□□□□□ -0.55
TPM4-212ENST00000590180 SELENOSQ9BQE4 189 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 DPH7Q9BTV6 452 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 FAM117AQ9C073 453 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 SLC25A18Q9H1K4 315 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 ADNPQ9H2P0 1102 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 PLAC1Q9HBJ0 212 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 MRPS30Q9NP92 439 aaKnown RBP11.6□□□□□ -0.55
TPM4-212ENST00000590180 ZNF71Q9NQZ8 489 aaPredicted RBP11.6□□□□□ -0.55
TPM4-212ENST00000590180 STARD5Q9NSY2 213 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 WHRNQ9P202 907 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 DHCR7Q9UBM7 475 aaKnown RBP11.6□□□□□ -0.55
TPM4-212ENST00000590180 SRPK3Q9UPE1 567 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 MAN2B2Q9Y2E5 1009 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 UTP11Q9Y3A2 253 aaKnown RBP11.6□□□□□ -0.55
TPM4-212ENST00000590180 HEMK1Q9Y5R4 338 aaPredicted RBP11.6□□□□□ -0.55
TPM4-212ENST00000590180 KCNMB2Q9Y691 235 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 SNRNP200O75643 2136 aaKnown RBP11.6□□□□□ -0.55
TPM4-212ENST00000590180 PCM1Q15154 2024 aa11.6□□□□□ -0.55
TPM4-212ENST00000590180 ZNF462Q96JM2 2506 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 H3BMH7 237 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 EIF3FO00303 357 aaPredicted RBP11.59□□□□□ -0.55
TPM4-212ENST00000590180 TP73O15350 636 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 SRPX2O60687 465 aaPredicted RBP11.59□□□□□ -0.55
TPM4-212ENST00000590180 CTSVO60911 334 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 SLC16A8O95907 504 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 EIF2S1P05198 315 aaKnown RBP11.59□□□□□ -0.55
TPM4-212ENST00000590180 HIST1H2AGP0C0S8 130 aaPredicted RBP11.59□□□□□ -0.55
TPM4-212ENST00000590180 HIST1H2ADP20671 130 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 ARSFP54793 590 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 NFKB2Q00653 900 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 TIAL1Q01085 375 aaKnown RBP eCLIP11.59□□□□□ -0.55
TPM4-212ENST00000590180 PDAP1Q13442 181 aaKnown RBP11.59□□□□□ -0.55
TPM4-212ENST00000590180 GRM7Q14831 915 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 SLC9A5Q14940 896 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 FASTKD3Q14CZ7 662 aaKnown RBP11.59□□□□□ -0.55
TPM4-212ENST00000590180 UGT8Q16880 541 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 FAM214AQ32MH5 1076 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 TCTE1Q5JU00 501 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 WASHC2DQ5SRD0 308 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 HECTD2Q5U5R9 776 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 FAM69BQ5VUD6 431 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 STEAP4Q687X5 459 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 LRRC8EQ6NSJ5 796 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 RHBDD2Q6NTF9 364 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 FBXO42Q6P3S6 717 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 CAPN12Q6ZSI9 719 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 TTLL10Q6ZVT0 673 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 STRA8Q7Z7C7 330 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 MYO1HQ8N1T3 1032 aa11.59□□□□□ -0.55
TPM4-212ENST00000590180 TTC29Q8NA56 475 aaPredicted RBP11.59□□□□□ -0.55
TPM4-212ENST00000590180 FBXO15Q8NCQ5 510 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms