RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 PRR5-ARHGAP8B1AHC4 643 aa16.87■□□□□ 0.29
CXXC1-212ENST00000589940 E9PBE3 544 aa16.87■□□□□ 0.29
CXXC1-212ENST00000589940 KLHL41O60662 606 aa16.87■□□□□ 0.29
CXXC1-212ENST00000589940 SLC2A4P14672 509 aa16.87■□□□□ 0.29
CXXC1-212ENST00000589940 GNSP15586 552 aa16.87■□□□□ 0.29
CXXC1-212ENST00000589940 XKR6Q5GH73 641 aa16.87■□□□□ 0.29
CXXC1-212ENST00000589940 PRAMEF14Q5SWL7 426 aa16.87■□□□□ 0.29
CXXC1-212ENST00000589940 THEMIS2Q5TEJ8 643 aa16.87■□□□□ 0.29
CXXC1-212ENST00000589940 PRAMEF13Q5VWM6 474 aa16.87■□□□□ 0.29
CXXC1-212ENST00000589940 LIPJQ5W064 366 aa16.87■□□□□ 0.29
CXXC1-212ENST00000589940 NXNQ6DKJ4 435 aa16.87■□□□□ 0.29
CXXC1-212ENST00000589940 CLNKQ7Z7G1 428 aa16.87■□□□□ 0.29
CXXC1-212ENST00000589940 C2orf73Q8N5S3 287 aaPredicted RBP16.87■□□□□ 0.29
CXXC1-212ENST00000589940 LINC01555Q8NAE3 123 aa16.87■□□□□ 0.29
CXXC1-212ENST00000589940 NEIL2Q969S2 332 aa16.87■□□□□ 0.29
CXXC1-212ENST00000589940 HAUS8Q9BT25 410 aa16.87■□□□□ 0.29
CXXC1-212ENST00000589940 TRIM33Q9UPN9 1127 aa16.87■□□□□ 0.29
CXXC1-212ENST00000589940 ICKQ9UPZ9 632 aa16.87■□□□□ 0.29
CXXC1-212ENST00000589940 SDK1Q7Z5N4 2213 aa16.87■□□□□ 0.29
CXXC1-212ENST00000589940 TRBV23OR9-2A0A075B6M9 112 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 KCNE1BA0A087WTH5 132 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 KIR2DS5A0A0G2JLQ3 304 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 A0A0G2JNG1 304 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 A0A1B0GTW7 788 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 KIR2DS3K7RE56 304 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 LINC00032P0C843 101 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 XRCC1P18887 633 aaPredicted RBP16.86■□□□□ 0.29
CXXC1-212ENST00000589940 HNRNPKP61978 463 aaKnown RBP eCLIP16.86■□□□□ 0.29
CXXC1-212ENST00000589940 KIR2DS5Q14953 304 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 CPSF6Q16630 551 aaKnown RBP eCLIP16.86■□□□□ 0.29
CXXC1-212ENST00000589940 XKR7Q5GH72 579 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 SPDYAQ5MJ70 313 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 LCTLQ6UWM7 567 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 GBP7Q8N8V2 638 aaPredicted RBP16.86■□□□□ 0.29
CXXC1-212ENST00000589940 OR2L8Q8NGY9 312 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 PCBD2Q9H0N5 130 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 XKR8Q9H6D3 395 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 SPASTQ9UBP0 616 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 ATP6AP2A0A1C7CYW4 349 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 FFAR3O14843 346 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 GPR42O15529 346 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 VPS4BO75351 444 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 ATP6AP2O75787 350 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 JUPP14923 745 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 CNR2P34972 360 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 CASP2P42575 452 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 HTR6P50406 440 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 DOC2AQ14183 400 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 E2F2Q14209 437 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 TBCCQ15814 346 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 ZNF528Q3MIS6 628 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 IL27RAQ6UWB1 636 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 SLCO4C1Q6ZQN7 724 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 RNF165Q6ZSG1 346 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 LARP4Q71RC2 724 aaKnown RBP eCLIP16.86■□□□□ 0.291e-7■□□□□ 11.3
CXXC1-212ENST00000589940 GKN2Q86XP6 184 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 TRIM48Q8IWZ4 208 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 FAM46DQ8NEK8 389 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 SH3KBP1Q96B97 665 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 SLC40A1Q9NP59 571 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 POT1Q9NUX5 634 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 SUSD2Q9UGT4 822 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 LAMA1P25391 3075 aa16.86■□□□□ 0.29
CXXC1-212ENST00000589940 A0A1B0GVT2 93 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 MANBAO00462 879 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 ULK1O75385 1050 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 KRT6AP02538 564 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 KRT6BP04259 564 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 HNF4AP41235 474 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 KRT6CP48668 564 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 CCDC121Q6ZUS5 278 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 NAGSQ8N159 534 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 SFRP1Q8N474 314 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 LMX1AQ8TE12 382 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 ZFPM2Q8WW38 1151 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 SLC5A11Q8WWX8 675 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 PATE1Q8WXA2 126 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 PRR11Q96HE9 360 aaPredicted RBP16.85■□□□□ 0.29
CXXC1-212ENST00000589940 ZC3H10Q96K80 434 aaKnown RBP16.85■□□□□ 0.29
CXXC1-212ENST00000589940 EHD1Q9H4M9 534 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 ERVMER34-1Q9H9K5 563 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 SAR1AQ9NR31 198 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 TMEM74BQ9NUR3 256 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 CPNE7Q9UBL6 633 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 PILRBQ9UKJ0 227 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 SNX6Q9UNH7 406 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 SH2B3Q9UQQ2 575 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 ARHGEF17Q96PE2 2063 aaPredicted RBP16.85■□□□□ 0.29
CXXC1-212ENST00000589940 A0A1W2PPV9 198 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 VIPP01282 170 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 NCF2P19878 526 aaPredicted RBP16.85■□□□□ 0.29
CXXC1-212ENST00000589940 CD22P20273 847 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 AVPR2P30518 371 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 SHMT2P34897 504 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 UBE2IP63279 158 aaKnown RBP16.85■□□□□ 0.29
CXXC1-212ENST00000589940 ABRAXAS2Q15018 415 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 ZRSR2Q15696 482 aaKnown RBP16.85■□□□□ 0.29
CXXC1-212ENST00000589940 GRHL2Q6ISB3 625 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 SCIMPQ6UWF3 145 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 CEP68Q76N32 757 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms