RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 CAPN13Q6MZZ7 669 aaPredicted RBP18.9■□□□□ 0.62
CIRBP-220ENST00000588917 TMPRSS9Q7Z410 1059 aa18.9■□□□□ 0.62
CIRBP-220ENST00000588917 PLD6Q8N2A8 252 aaKnown RBP18.9■□□□□ 0.62
CIRBP-220ENST00000588917 C2orf73Q8N5S3 287 aaPredicted RBP18.9■□□□□ 0.62
CIRBP-220ENST00000588917 LMNTD1Q8N9Z9 388 aa18.9■□□□□ 0.62
CIRBP-220ENST00000588917 AGBL5Q8NDL9 886 aa18.9■□□□□ 0.62
CIRBP-220ENST00000588917 KLHL6Q8WZ60 621 aa18.9■□□□□ 0.62
CIRBP-220ENST00000588917 ZUFSPQ96AP4 578 aa18.9■□□□□ 0.62
CIRBP-220ENST00000588917 ALKBH8Q96BT7 664 aaKnown RBP18.9■□□□□ 0.62
CIRBP-220ENST00000588917 PGM2Q96G03 612 aa18.9■□□□□ 0.62
CIRBP-220ENST00000588917 LIN37Q96GY3 246 aaPredicted RBP18.9■□□□□ 0.62
CIRBP-220ENST00000588917 CCDC74BQ96LY2 380 aa18.9■□□□□ 0.62
CIRBP-220ENST00000588917 ATOH8Q96SQ7 321 aa18.9■□□□□ 0.62
CIRBP-220ENST00000588917 MIPEPQ99797 713 aa18.9■□□□□ 0.62
CIRBP-220ENST00000588917 CCDC177Q9NQR7 707 aaPredicted RBP18.9■□□□□ 0.62
CIRBP-220ENST00000588917 SPHK1Q9NYA1 384 aa18.9■□□□□ 0.62
CIRBP-220ENST00000588917 NUDT4Q9NZJ9 180 aa18.9■□□□□ 0.62
CIRBP-220ENST00000588917 WDFY3Q8IZQ1 3526 aa18.9■□□□□ 0.62
CIRBP-220ENST00000588917 A0A0J9YY10 115 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 A8MU76 341 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 GOLGA8RI6L899 631 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 CASC3O15234 703 aaKnown RBP18.89■□□□□ 0.61
CIRBP-220ENST00000588917 GLRA3O75311 464 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 IPO13O94829 963 aaKnown RBP18.89■□□□□ 0.61
CIRBP-220ENST00000588917 ZBTB11O95625 1053 aaPredicted RBP18.89■□□□□ 0.61
CIRBP-220ENST00000588917 MPSTP25325 297 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 CMPK1P30085 196 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 CRHR1P34998 444 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 GGT5P36269 586 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 ABATP80404 500 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 NAE1Q13564 534 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 FASTKQ14296 549 aaKnown RBP18.89■□□□□ 0.61
CIRBP-220ENST00000588917 TMTC4Q5T4D3 741 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 CYB5D1Q6P9G0 228 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 SH2D5Q6ZV89 423 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 TRABD2AQ86V40 505 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 LRRC56Q8IYG6 542 aaPredicted RBP18.89■□□□□ 0.61
CIRBP-220ENST00000588917 OR2A1Q8NGT9 310 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 RHBDF1Q96CC6 855 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 NRTNQ99748 197 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 MAP3K3Q99759 626 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 HAUS8Q9BT25 410 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 CAPS2Q9BXY5 557 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 PITPNM3Q9BZ71 974 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 ATG10Q9H0Y0 220 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 MRPL46Q9H2W6 279 aaKnown RBP18.89■□□□□ 0.61
CIRBP-220ENST00000588917 ZNF768Q9H5H4 540 aaKnown RBP18.89■□□□□ 0.61
CIRBP-220ENST00000588917 TMEM9Q9P0T7 183 aa18.89■□□□□ 0.61
CIRBP-220ENST00000588917 CCDC187A0A096LP49 1063 aa18.88■□□□□ 0.61
CIRBP-220ENST00000588917 KRT87PA6NCN2 255 aa18.88■□□□□ 0.61
CIRBP-220ENST00000588917 TARM1B6A8C7 271 aa18.88■□□□□ 0.61
CIRBP-220ENST00000588917 COPEO14579 308 aa18.88■□□□□ 0.61
CIRBP-220ENST00000588917 MAP2K7O14733 419 aa18.88■□□□□ 0.61
CIRBP-220ENST00000588917 HRH2P25021 359 aa18.88■□□□□ 0.61
CIRBP-220ENST00000588917 GMPRP36959 345 aa18.88■□□□□ 0.61
CIRBP-220ENST00000588917 KCNC1P48547 511 aa18.88■□□□□ 0.61
CIRBP-220ENST00000588917 HSD11B2P80365 405 aa18.88■□□□□ 0.61
CIRBP-220ENST00000588917 SLC18A2Q05940 514 aa18.88■□□□□ 0.61
CIRBP-220ENST00000588917 PRDX1Q06830 199 aaKnown RBP18.88■□□□□ 0.61
CIRBP-220ENST00000588917 TSTA3Q13630 321 aaPredicted RBP18.88■□□□□ 0.61
CIRBP-220ENST00000588917 TECRLQ5HYJ1 363 aa18.88■□□□□ 0.61
CIRBP-220ENST00000588917 SUSD1Q6UWL2 747 aa18.88■□□□□ 0.61
CIRBP-220ENST00000588917 B3GNT8Q7Z7M8 397 aa18.88■□□□□ 0.61
CIRBP-220ENST00000588917 PDPRQ8NCN5 879 aa18.88■□□□□ 0.61
CIRBP-220ENST00000588917 OR56A3Q8NH54 315 aa18.88■□□□□ 0.61
CIRBP-220ENST00000588917 WDR36Q8NI36 951 aaKnown RBP18.88■□□□□ 0.61
CIRBP-220ENST00000588917 MED8Q96G25 268 aa18.88■□□□□ 0.61
CIRBP-220ENST00000588917 SMC6Q96SB8 1091 aa18.88■□□□□ 0.61
CIRBP-220ENST00000588917 SGPP1Q9BX95 441 aa18.88■□□□□ 0.61
CIRBP-220ENST00000588917 CENPHQ9H3R5 247 aa18.88■□□□□ 0.61
CIRBP-220ENST00000588917 VIPAS39Q9H9C1 493 aa18.88■□□□□ 0.61
CIRBP-220ENST00000588917 ZNF358Q9NW07 568 aa18.88■□□□□ 0.61
CIRBP-220ENST00000588917 DSPP15924 2871 aaKnown RBP18.88■□□□□ 0.61
CIRBP-220ENST00000588917 A0A1W2PPV9 198 aa18.87■□□□□ 0.61
CIRBP-220ENST00000588917 NCF1BA6NI72 391 aaPredicted RBP18.87■□□□□ 0.61
CIRBP-220ENST00000588917 NCF1CA8MVU1 366 aaPredicted RBP18.87■□□□□ 0.61
CIRBP-220ENST00000588917 SUPT3HB4E1H0 165 aa18.87■□□□□ 0.61
CIRBP-220ENST00000588917 KIF1CO43896 1103 aaKnown RBP18.87■□□□□ 0.61
CIRBP-220ENST00000588917 SMIM24O75264 130 aa18.87■□□□□ 0.61
CIRBP-220ENST00000588917 SUPT3HO75486 399 aa18.87■□□□□ 0.61
CIRBP-220ENST00000588917 NCF1P14598 390 aaPredicted RBP18.87■□□□□ 0.61
CIRBP-220ENST00000588917 NELFEP18615 380 aaKnown RBP18.87■□□□□ 0.61
CIRBP-220ENST00000588917 TAC1P20366 129 aa18.87■□□□□ 0.61
CIRBP-220ENST00000588917 CCDC153Q494R4 210 aa18.87■□□□□ 0.61
CIRBP-220ENST00000588917 METTL2BQ6P1Q9 378 aaKnown RBP18.87■□□□□ 0.61
CIRBP-220ENST00000588917 LCTLQ6UWM7 567 aa18.87■□□□□ 0.61
CIRBP-220ENST00000588917 MBOAT1Q6ZNC8 495 aa18.87■□□□□ 0.61
CIRBP-220ENST00000588917 RAB11FIP2Q7L804 512 aa18.87■□□□□ 0.61
CIRBP-220ENST00000588917 TAX1BP1Q86VP1 789 aa18.87■□□□□ 0.61
CIRBP-220ENST00000588917 PPFIBP2Q8ND30 876 aa18.87■□□□□ 0.61
CIRBP-220ENST00000588917 FLVCR1-AS1Q8TAF5 88 aa18.87■□□□□ 0.61
CIRBP-220ENST00000588917 TCTN2Q96GX1 697 aa18.87■□□□□ 0.61
CIRBP-220ENST00000588917 TRAPPC9Q96Q05 1148 aa18.87■□□□□ 0.61
CIRBP-220ENST00000588917 CHRNA10Q9GZZ6 450 aa18.87■□□□□ 0.61
CIRBP-220ENST00000588917 IQCGQ9H095 443 aaKnown RBP18.87■□□□□ 0.61
CIRBP-220ENST00000588917 PDE7BQ9NP56 450 aa18.87■□□□□ 0.61
CIRBP-220ENST00000588917 WWOXQ9NZC7 414 aa18.87■□□□□ 0.61
CIRBP-220ENST00000588917 PTBP2Q9UKA9 531 aaKnown RBP18.87■□□□□ 0.61
CIRBP-220ENST00000588917 SNX7Q9UNH6 387 aa18.87■□□□□ 0.61
CIRBP-220ENST00000588917 TNPO3Q9Y5L0 923 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms