RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 SPASTQ9UBP0 616 aa21.56■■□□□ 1.04
ATG4D-209ENST00000588857 SUSD2Q9UGT4 822 aa21.56■■□□□ 1.04
ATG4D-209ENST00000588857 TRPS1Q9UHF7 1281 aa21.56■■□□□ 1.04
ATG4D-209ENST00000588857 PI4KAP42356 2102 aa21.55■■□□□ 1.04
ATG4D-209ENST00000588857 GOLGA8QA0A0J9YX86 632 aa21.55■■□□□ 1.04
ATG4D-209ENST00000588857 GOLGA8OA6NCC3 632 aa21.55■■□□□ 1.04
ATG4D-209ENST00000588857 GOLGA8NF8WBI6 632 aa21.55■■□□□ 1.04
ATG4D-209ENST00000588857 GNAZP19086 355 aa21.55■■□□□ 1.04
ATG4D-209ENST00000588857 EPHA3P29320 983 aa21.55■■□□□ 1.04
ATG4D-209ENST00000588857 HNRNPKP61978 463 aaKnown RBP eCLIP21.55■■□□□ 1.04
ATG4D-209ENST00000588857 IRF8Q02556 426 aa21.55■■□□□ 1.04
ATG4D-209ENST00000588857 IFT88Q13099 833 aa21.55■■□□□ 1.04
ATG4D-209ENST00000588857 SUSD1Q6UWL2 747 aa21.55■■□□□ 1.04
ATG4D-209ENST00000588857 TRPM8Q7Z2W7 1104 aa21.55■■□□□ 1.04
ATG4D-209ENST00000588857 MTDHQ86UE4 582 aaKnown RBP21.55■■□□□ 1.04
ATG4D-209ENST00000588857 GKN2Q86XP6 184 aa21.55■■□□□ 1.04
ATG4D-209ENST00000588857 C2orf73Q8N5S3 287 aaPredicted RBP21.55■■□□□ 1.04
ATG4D-209ENST00000588857 OR52E1Q8NGJ3 308 aa21.55■■□□□ 1.04
ATG4D-209ENST00000588857 SMPDL3AQ92484 453 aa21.55■■□□□ 1.04
ATG4D-209ENST00000588857 CCT6BQ92526 530 aa21.55■■□□□ 1.04
ATG4D-209ENST00000588857 SH3KBP1Q96B97 665 aa21.55■■□□□ 1.04
ATG4D-209ENST00000588857 C19orf60Q96EN9 201 aa21.55■■□□□ 1.04
ATG4D-209ENST00000588857 MENTQ9BUN1 341 aa21.55■■□□□ 1.04
ATG4D-209ENST00000588857 DOLKQ9UPQ8 538 aa21.55■■□□□ 1.04
ATG4D-209ENST00000588857 RNF11Q9Y3C5 154 aa21.55■■□□□ 1.04
ATG4D-209ENST00000588857 KIR2DS5A0A0G2JLQ3 304 aa21.54■■□□□ 1.04
ATG4D-209ENST00000588857 A0A0G2JNG1 304 aa21.54■■□□□ 1.04
ATG4D-209ENST00000588857 KIR2DS3K7RE56 304 aa21.54■■□□□ 1.04
ATG4D-209ENST00000588857 SLC19A1P41440 591 aa21.54■■□□□ 1.04
ATG4D-209ENST00000588857 INHBCP55103 352 aa21.54■■□□□ 1.04
ATG4D-209ENST00000588857 CHIT1Q13231 466 aa21.54■■□□□ 1.04
ATG4D-209ENST00000588857 KIR2DS5Q14953 304 aa21.54■■□□□ 1.04
ATG4D-209ENST00000588857 XKR6Q5GH73 641 aa21.54■■□□□ 1.04
ATG4D-209ENST00000588857 NXNQ6DKJ4 435 aa21.54■■□□□ 1.04
ATG4D-209ENST00000588857 LMNTD1Q8N9Z9 388 aa21.54■■□□□ 1.04
ATG4D-209ENST00000588857 FAM46DQ8NEK8 389 aa21.54■■□□□ 1.04
ATG4D-209ENST00000588857 LMX1AQ8TE12 382 aa21.54■■□□□ 1.04
ATG4D-209ENST00000588857 HAUS8Q9BT25 410 aa21.54■■□□□ 1.04
ATG4D-209ENST00000588857 SLC29A3Q9BZD2 475 aa21.54■■□□□ 1.04
ATG4D-209ENST00000588857 PCBD2Q9H0N5 130 aa21.54■■□□□ 1.04
ATG4D-209ENST00000588857 RIF1Q5UIP0 2472 aaKnown RBP21.54■■□□□ 1.04
ATG4D-209ENST00000588857 PRAMEF33A0A0G2JMD5 474 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 A0A1B0GVT2 93 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 CCT8L1PA6NM43 557 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 SDHDO14521 159 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 PIP5K1BO14986 540 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 UGDHO60701 494 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 CCDC22O60826 627 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 VIPP01282 170 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 NPPBP16860 134 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 PKLRP30613 574 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 PRAMEF14Q5SWL7 426 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 PRAMEF13Q5VWM6 474 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 C6orf89Q6UWU4 347 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 L3MBTL4Q8NA19 623 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 ZC3H10Q96K80 434 aaKnown RBP21.53■■□□□ 1.04
ATG4D-209ENST00000588857 OR52B2Q96RD2 323 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 CCT7Q99832 543 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 CCDC28BQ9BUN5 200 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 XKR8Q9H6D3 395 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 PILRBQ9UKJ0 227 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 BTRCQ9Y297 605 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 CACNA1EQ15878 2313 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 TMEM131Q92545 1883 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 PTPRZ1P23471 2315 aaPredicted RBP21.53■■□□□ 1.04
ATG4D-209ENST00000588857 E7EQ34 232 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 XRCC1P18887 633 aaPredicted RBP21.53■■□□□ 1.04
ATG4D-209ENST00000588857 SHMT2P34897 504 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 TUBB3Q13509 450 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 CPSF6Q16630 551 aaKnown RBP eCLIP21.53■■□□□ 1.04
ATG4D-209ENST00000588857 GGTA1PQ4G0N0 100 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 LIPJQ5W064 366 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 FAM219BQ5XKK7 198 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 LCTLQ6UWM7 567 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 OR2L8Q8NGY9 312 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 ZDHHC1Q8WTX9 485 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 LCN9Q8WX39 176 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 NEIL2Q969S2 332 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 MAELQ96JY0 434 aaKnown RBP21.53■■□□□ 1.04
ATG4D-209ENST00000588857 TUBB1Q9H4B7 451 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 ERVMER34-1Q9H9K5 563 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 TRIM33Q9UPN9 1127 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 ICKQ9UPZ9 632 aa21.53■■□□□ 1.04
ATG4D-209ENST00000588857 GPR179Q6PRD1 2367 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 FFAR3O14843 346 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 GPR42O15529 346 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 AQP9O43315 295 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 WFS1O76024 890 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 KRT6AP02538 564 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 KRT6BP04259 564 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 LINC00032P0C843 101 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 KRT6CP48668 564 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 PCDH1Q08174 1060 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 LSM12Q3MHD2 195 aaKnown RBP21.52■■□□□ 1.04
ATG4D-209ENST00000588857 METTL21CQ5VZV1 264 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 IL27RAQ6UWB1 636 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 SDR16C5Q8N3Y7 309 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 FITM2Q8N6M3 262 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 CEP70Q8NHQ1 597 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 HMGCLL1Q8TB92 370 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms