RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 HMGCLL1Q8TB92 370 aa17.6■□□□□ 0.41
CCDC43-204ENST00000588687 ASZ1Q8WWH4 475 aa17.6■□□□□ 0.41
CCDC43-204ENST00000588687 PSMF1Q92530 271 aa17.6■□□□□ 0.41
CCDC43-204ENST00000588687 THOC3Q96J01 351 aaKnown RBP17.6■□□□□ 0.41
CCDC43-204ENST00000588687 C10orf90Q96M02 699 aa17.6■□□□□ 0.41
CCDC43-204ENST00000588687 ALS2CR12Q96Q35 445 aa17.6■□□□□ 0.41
CCDC43-204ENST00000588687 SYNPO2LQ9H987 977 aa17.6■□□□□ 0.41
CCDC43-204ENST00000588687 INTS7Q9NVH2 962 aaKnown RBP17.6■□□□□ 0.41
CCDC43-204ENST00000588687 MARCH4Q9P2E8 410 aaPredicted RBP17.6■□□□□ 0.41
CCDC43-204ENST00000588687 MAU2Q9Y6X3 613 aa17.6■□□□□ 0.41
CCDC43-204ENST00000588687 TARM1B6A8C7 271 aa17.59■□□□□ 0.41
CCDC43-204ENST00000588687 FKBP9O95302 570 aa17.59■□□□□ 0.41
CCDC43-204ENST00000588687 HPP00738 406 aa17.59■□□□□ 0.41
CCDC43-204ENST00000588687 RPN2P04844 631 aa17.59■□□□□ 0.41
CCDC43-204ENST00000588687 CETN2P41208 172 aa17.59■□□□□ 0.41
CCDC43-204ENST00000588687 KLC1Q07866 573 aa17.59■□□□□ 0.41
CCDC43-204ENST00000588687 SF1Q15637 639 aaKnown RBP17.59■□□□□ 0.41
CCDC43-204ENST00000588687 OASLQ15646 514 aaKnown RBP17.59■□□□□ 0.41
CCDC43-204ENST00000588687 ATG9BQ674R7 924 aa17.59■□□□□ 0.41
CCDC43-204ENST00000588687 ISLR2Q6UXK2 745 aa17.59■□□□□ 0.41
CCDC43-204ENST00000588687 RAD9BQ6WBX8 426 aa17.59■□□□□ 0.41
CCDC43-204ENST00000588687 NLRP9Q7RTR0 991 aa17.59■□□□□ 0.41
CCDC43-204ENST00000588687 LDB1Q86U70 411 aaPredicted RBP17.59■□□□□ 0.41
CCDC43-204ENST00000588687 CATSPER1Q8NEC5 780 aa17.59■□□□□ 0.41
CCDC43-204ENST00000588687 CFAP61Q8NHU2 1237 aa17.59■□□□□ 0.41
CCDC43-204ENST00000588687 STT3BQ8TCJ2 826 aa17.59■□□□□ 0.41
CCDC43-204ENST00000588687 ATG4AQ8WYN0 398 aa17.59■□□□□ 0.41
CCDC43-204ENST00000588687 MARVELD3Q96A59 401 aa17.59■□□□□ 0.41
CCDC43-204ENST00000588687 TAAR6Q96RI8 345 aa17.59■□□□□ 0.41
CCDC43-204ENST00000588687 CRB3Q9BUF7 120 aa17.59■□□□□ 0.41
CCDC43-204ENST00000588687 P2RY12Q9H244 342 aa17.59■□□□□ 0.41
CCDC43-204ENST00000588687 TCAF1Q9Y4C2 921 aa17.59■□□□□ 0.41
CCDC43-204ENST00000588687 NFS1Q9Y697 457 aa17.59■□□□□ 0.41
CCDC43-204ENST00000588687 LOC105369274A0A096LPK9 316 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 LOC102723532A0A0G2JNH3 316 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 GOLGA6L9A6NEM1 432 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 HNRNPRO43390 633 aaKnown RBP17.58■□□□□ 0.4
CCDC43-204ENST00000588687 APOA4P06727 396 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 COX6A1P12074 109 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 BDKRB1P46663 353 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 PER3P56645 1201 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 VSX2P58304 361 aaPredicted RBP17.58■□□□□ 0.4
CCDC43-204ENST00000588687 YBX1P67809 324 aaKnown RBP17.58■□□□□ 0.4
CCDC43-204ENST00000588687 WASHC2DQ5SRD0 308 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 LINC00696Q6ZRV3 163 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 SRRM1Q8IYB3 904 aaKnown RBP17.58■□□□□ 0.4
CCDC43-204ENST00000588687 OR4N4Q8N0Y3 316 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 DNAAF3Q8N9W5 541 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 TTC29Q8NA56 475 aaPredicted RBP17.58■□□□□ 0.4
CCDC43-204ENST00000588687 ACRBPQ8NEB7 543 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 OR2L3Q8NG85 312 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 OR2A1Q8NGT9 310 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 PEX13Q92968 403 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 ZUFSPQ96AP4 578 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 C8orf44Q96CB5 159 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 PANX2Q96RD6 677 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 LMF1Q96S06 567 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 RAB11FIP5Q9BXF6 653 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 ETNK1Q9HBU6 452 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 ZNF160Q9HCG1 818 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 IL1RAPL1Q9NZN1 696 aa17.58■□□□□ 0.4
CCDC43-204ENST00000588687 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.58■□□□□ 0.4
CCDC43-204ENST00000588687 RUVBL2Q9Y230 463 aaKnown RBP17.58■□□□□ 0.4
CCDC43-204ENST00000588687 OR2A25A4D2G3 310 aa17.57■□□□□ 0.4
CCDC43-204ENST00000588687 F8W8V4 182 aa17.57■□□□□ 0.4
CCDC43-204ENST00000588687 PCDH17O14917 1159 aa17.57■□□□□ 0.4
CCDC43-204ENST00000588687 SRPX2O60687 465 aaPredicted RBP17.57■□□□□ 0.4
CCDC43-204ENST00000588687 C1orf105O95561 183 aa17.57■□□□□ 0.4
CCDC43-204ENST00000588687 ZGLP1P0C6A0 271 aa17.57■□□□□ 0.4
CCDC43-204ENST00000588687 ACPPP15309 386 aa17.57■□□□□ 0.4
CCDC43-204ENST00000588687 ADRA1DP25100 572 aa17.57■□□□□ 0.4
CCDC43-204ENST00000588687 PRTGQ2VWP7 1150 aa17.57■□□□□ 0.4
CCDC43-204ENST00000588687 FAM214AQ32MH5 1076 aa17.57■□□□□ 0.4
CCDC43-204ENST00000588687 IRAK1BP1Q5VVH5 260 aa17.57■□□□□ 0.4
CCDC43-204ENST00000588687 FAM180AQ6UWF9 173 aa17.57■□□□□ 0.4
CCDC43-204ENST00000588687 TTC1Q99614 292 aa17.57■□□□□ 0.4
CCDC43-204ENST00000588687 MIPEPQ99797 713 aa17.57■□□□□ 0.4
CCDC43-204ENST00000588687 UNKQ9C0B0 810 aaKnown RBP17.57■□□□□ 0.4
CCDC43-204ENST00000588687 ZNF304Q9HCX3 659 aa17.57■□□□□ 0.4
CCDC43-204ENST00000588687 OLAHQ9NV23 265 aa17.57■□□□□ 0.4
CCDC43-204ENST00000588687 SLC39A10Q9ULF5 831 aa17.57■□□□□ 0.4
CCDC43-204ENST00000588687 HEATR5BQ9P2D3 2071 aa17.57■□□□□ 0.4
CCDC43-204ENST00000588687 A0A0U1RQJ8 604 aa17.56■□□□□ 0.4
CCDC43-204ENST00000588687 ARHGAP10A1A4S6 786 aa17.56■□□□□ 0.4
CCDC43-204ENST00000588687 HYKKA2RU49 373 aa17.56■□□□□ 0.4
CCDC43-204ENST00000588687 PRMT5O14744 637 aaPredicted RBP17.56■□□□□ 0.4
CCDC43-204ENST00000588687 POU3F2P20265 443 aaPredicted RBP17.56■□□□□ 0.4
CCDC43-204ENST00000588687 PTMSP20962 102 aa17.56■□□□□ 0.4
CCDC43-204ENST00000588687 CARSP49589 748 aaKnown RBP17.56■□□□□ 0.4
CCDC43-204ENST00000588687 EFNA3P52797 238 aa17.56■□□□□ 0.4
CCDC43-204ENST00000588687 NAP1L1P55209 391 aaKnown RBP17.56■□□□□ 0.4
CCDC43-204ENST00000588687 GBX1Q14549 363 aa17.56■□□□□ 0.4
CCDC43-204ENST00000588687 FASTKD1Q53R41 847 aaKnown RBP17.56■□□□□ 0.4
CCDC43-204ENST00000588687 PRMT9Q6P2P2 845 aa17.56■□□□□ 0.4
CCDC43-204ENST00000588687 PEX26Q7Z412 305 aa17.56■□□□□ 0.4
CCDC43-204ENST00000588687 LAPTM4BQ86VI4 370 aa17.56■□□□□ 0.4
CCDC43-204ENST00000588687 FJX1Q86VR8 437 aa17.56■□□□□ 0.4
CCDC43-204ENST00000588687 ARHGEF39Q8N4T4 335 aa17.56■□□□□ 0.4
CCDC43-204ENST00000588687 BCORP1Q8N888 145 aa17.56■□□□□ 0.4
CCDC43-204ENST00000588687 OR6P1Q8NGX9 317 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms