RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 NKG7Q16617 165 aa16.22■□□□□ 0.19
TMED1-203ENST00000588259 HIF1AQ16665 826 aa16.22■□□□□ 0.19
TMED1-203ENST00000588259 YOD1Q5VVQ6 348 aaPredicted RBP16.22■□□□□ 0.19
TMED1-203ENST00000588259 PRAMEF13Q5VWM6 474 aa16.22■□□□□ 0.19
TMED1-203ENST00000588259 CES3Q6UWW8 571 aa16.22■□□□□ 0.19
TMED1-203ENST00000588259 IGFL3Q6UXB1 125 aa16.22■□□□□ 0.19
TMED1-203ENST00000588259 MPP5Q8N3R9 675 aa16.22■□□□□ 0.19
TMED1-203ENST00000588259 DTWD1Q8N5C7 304 aa16.22■□□□□ 0.19
TMED1-203ENST00000588259 CNDP1Q96KN2 507 aa16.22■□□□□ 0.19
TMED1-203ENST00000588259 MRM3Q9HC36 420 aaKnown RBP16.22■□□□□ 0.19
TMED1-203ENST00000588259 ZBTB20Q9HC78 741 aaPredicted RBP16.22■□□□□ 0.19
TMED1-203ENST00000588259 NXT1Q9UKK6 140 aaKnown RBP16.22■□□□□ 0.19
TMED1-203ENST00000588259 DOPEY1Q5JWR5 2465 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 A0A0J9YVX5 310 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 GOLGA8KD6RF30 607 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 GOLGA8TH3BQL2 631 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 CTSVO60911 334 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 VAPBO95292 243 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 FKBP9O95302 570 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 C1orf105O95561 183 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 DDAH2O95865 285 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 ALBP02768 609 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 CDC25BP30305 580 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 FMO4P31512 558 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 CCNFP41002 786 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 CCNG2Q16589 344 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 FAM214AQ32MH5 1076 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 TUBB8Q3ZCM7 444 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 CCSMST1Q4G0I0 132 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 WASHC2DQ5SRD0 308 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 AGAP7PQ5VUJ5 663 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 MRNIPQ6NTE8 343 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 COX15Q7KZN9 410 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 SDCCAG8Q86SQ7 713 aaPredicted RBP16.21■□□□□ 0.19
TMED1-203ENST00000588259 GAS2L3Q86XJ1 694 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 PARP9Q8IXQ6 854 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 INPP5DQ92835 1189 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 VPS50Q96JG6 964 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 AGAP4Q96P64 663 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 SPSB2Q99619 263 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 WDR77Q9BQA1 342 aaPredicted RBP16.21■□□□□ 0.19
TMED1-203ENST00000588259 CRB3Q9BUF7 120 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 ACAT2Q9BWD1 397 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 P2RY12Q9H244 342 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 TREX1Q9NSU2 369 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 SYBUQ9NX95 663 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 HS3ST3B1Q9Y662 390 aa16.21■□□□□ 0.19
TMED1-203ENST00000588259 HYKKA2RU49 373 aa16.2■□□□□ 0.18
TMED1-203ENST00000588259 AP3B1O00203 1094 aa16.2■□□□□ 0.18
TMED1-203ENST00000588259 SOCS6O14544 535 aa16.2■□□□□ 0.18
TMED1-203ENST00000588259 PFDN6O15212 129 aa16.2■□□□□ 0.18
TMED1-203ENST00000588259 NRP2O60462 931 aa16.2■□□□□ 0.18
TMED1-203ENST00000588259 NIPSNAP2O75323 286 aa16.2■□□□□ 0.18
TMED1-203ENST00000588259 GCGRP47871 477 aa16.2■□□□□ 0.18
TMED1-203ENST00000588259 NPY2RP49146 381 aa16.2■□□□□ 0.18
TMED1-203ENST00000588259 OCA2Q04671 838 aa16.2■□□□□ 0.18
TMED1-203ENST00000588259 KCTD19Q17RG1 926 aaPredicted RBP16.2■□□□□ 0.18
TMED1-203ENST00000588259 FRMPD2BQ6IN97 320 aa16.2■□□□□ 0.18
TMED1-203ENST00000588259 C4orf22Q6V702 233 aa16.2■□□□□ 0.18
TMED1-203ENST00000588259 CUZD1Q86UP6 607 aa16.2■□□□□ 0.18
TMED1-203ENST00000588259 OR2L3Q8NG85 312 aa16.2■□□□□ 0.18
TMED1-203ENST00000588259 MAGEC3Q8TD91 643 aa16.2■□□□□ 0.18
TMED1-203ENST00000588259 ZUFSPQ96AP4 578 aa16.2■□□□□ 0.18
TMED1-203ENST00000588259 C5orf34Q96MH7 638 aa16.2■□□□□ 0.18
TMED1-203ENST00000588259 LZTFL1Q9NQ48 299 aa16.2■□□□□ 0.18
TMED1-203ENST00000588259 AGPAT4Q9NRZ5 378 aa16.2■□□□□ 0.18
TMED1-203ENST00000588259 ZC3H7BQ9UGR2 993 aaKnown RBP16.2■□□□□ 0.18
TMED1-203ENST00000588259 ERRFI1Q9UJM3 462 aaPredicted RBP16.2■□□□□ 0.18
TMED1-203ENST00000588259 PCDHGA10Q9Y5H3 936 aa16.2■□□□□ 0.18
TMED1-203ENST00000588259 CSAG2Q9Y5P2 127 aa16.2■□□□□ 0.18
TMED1-203ENST00000588259 DIDO1Q9BTC0 2240 aaKnown RBP16.2■□□□□ 0.18
TMED1-203ENST00000588259 CENPEQ02224 2701 aa16.2■□□□□ 0.18
TMED1-203ENST00000588259 TARM1B6A8C7 271 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 SRPX2O60687 465 aaPredicted RBP16.19■□□□□ 0.18
TMED1-203ENST00000588259 CBX6O95503 412 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 FGGP02679 453 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 UQCRHP07919 91 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 RPS3P23396 243 aaKnown RBP eCLIP16.19■□□□□ 0.186e-7■■■■■ 31.5
TMED1-203ENST00000588259 CMPK1P30085 196 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 VPS41P49754 854 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 SOX8P57073 446 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 SIX1Q15475 284 aaPredicted RBP16.19■□□□□ 0.18
TMED1-203ENST00000588259 CTSL3PQ5NE16 218 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 RNF187Q5TA31 235 aaPredicted RBP16.19■□□□□ 0.18
TMED1-203ENST00000588259 MEI1Q5TIA1 1274 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 CASC4Q6P4E1 433 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 KIRREL2Q6UWL6 708 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 Q6ZS92 163 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 UBE2Q2Q8WVN8 375 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 NACC2Q96BF6 587 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 MFSD3Q96ES6 412 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 CABS1Q96KC9 395 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 YIPF2Q9BWQ6 316 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 SLC26A1Q9H2B4 701 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 EPS8L2Q9H6S3 715 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 ZNF304Q9HCX3 659 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 SEMA3GQ9NS98 782 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 IL1RAPL1Q9NZN1 696 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 SPATA7Q9P0W8 599 aa16.19■□□□□ 0.18
TMED1-203ENST00000588259 STOX2Q9P2F5 926 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms