RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 OR56A5P0C7T3 313 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 PRR35P0CG20 571 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 PIM1P11309 404 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-225ENST00000586385 ACPPP15309 386 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 CTNNA2P26232 953 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 GRIA1P42261 906 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 TNFSF10P50591 281 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 VSX2P58304 361 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-225ENST00000586385 SNRPNP63162 240 aaKnown RBP11.34□□□□□ -0.59
BRCA1-225ENST00000586385 ACVR1Q04771 509 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 HSPA14Q0VDF9 509 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 ZC3H12BQ5HYM0 836 aaKnown RBP11.34□□□□□ -0.59
BRCA1-225ENST00000586385 TCTE1Q5JU00 501 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 WASHC2DQ5SRD0 308 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 NLRP9Q7RTR0 991 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 LDB1Q86U70 411 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-225ENST00000586385 DCUN1D3Q8IWE4 304 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 KRT222Q8N1A0 295 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 OR52K1Q8NGK4 314 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 CFAP61Q8NHU2 1237 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 BRIX1Q8TDN6 353 aaKnown RBP11.34□□□□□ -0.59
BRCA1-225ENST00000586385 HDAC10Q969S8 669 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 CCDC120Q96HB5 630 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 ANP32EQ9BTT0 268 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 PTGFRNQ9P2B2 879 aa11.34□□□□□ -0.59
BRCA1-225ENST00000586385 KLF2Q9Y5W3 355 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-225ENST00000586385 TCRBV7S2A1N4TA0A589 114 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 HYKKA2RU49 373 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 TARM1B6A8C7 271 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 AKR1B15C9JRZ8 316 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-225ENST00000586385 FFAR3O14843 346 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 GPR42O15529 346 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 F10P00742 488 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 TPM1P09493 284 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 AOAHP28039 575 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 RIPPLY3P57055 190 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 KLF1Q13351 362 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-225ENST00000586385 SF1Q15637 639 aaKnown RBP11.33□□□□□ -0.6
BRCA1-225ENST00000586385 PRTGQ2VWP7 1150 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 VWA2Q5GFL6 755 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 TSTD2Q5T7W7 516 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 IRAK1BP1Q5VVH5 260 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 UNC5DQ6UXZ4 953 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 RNF44Q7L0R7 432 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 CNGA4Q8IV77 575 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 ZNF295-AS1Q8N0V1 137 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 SHISA5Q8N114 240 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 ARHGEF39Q8N4T4 335 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 SIRT6Q8N6T7 355 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 LRRC57Q8N9N7 239 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 SLC35B2Q8TB61 432 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 HAS2Q92819 552 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 SLC22A18Q96BI1 424 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 MOCOSQ96EN8 888 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 LURAP1Q96LR2 239 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 MAGEB10Q96LZ2 347 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-225ENST00000586385 MIPEPQ99797 713 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 FERMT1Q9BQL6 677 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 TRIM8Q9BZR9 551 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 ZNF304Q9HCX3 659 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-225ENST00000586385 MARCH4Q9P2E8 410 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-225ENST00000586385 C3orf18Q9UK00 162 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 RUVBL2Q9Y230 463 aaKnown RBP11.33□□□□□ -0.6
BRCA1-225ENST00000586385 MRPS2Q9Y399 296 aaKnown RBP11.33□□□□□ -0.6
BRCA1-225ENST00000586385 REXO2Q9Y3B8 237 aaKnown RBP11.33□□□□□ -0.6
BRCA1-225ENST00000586385 NFS1Q9Y697 457 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 MYO7BQ6PIF6 2116 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 AKAP9Q99996 3911 aa11.33□□□□□ -0.6
BRCA1-225ENST00000586385 HIVEP1P15822 2718 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 PKDREJQ9NTG1 2253 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 IGHV1-45A0A0A0MS14 117 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 A0A0J9YVX5 310 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 HEATR9A2RTY3 570 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 OR2A25A4D2G3 310 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 MAP2K7O14733 419 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 SRPX2O60687 465 aaPredicted RBP11.32□□□□□ -0.6
BRCA1-225ENST00000586385 KRT38O76015 456 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 USP1O94782 785 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 TJP3O95049 919 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 SERPINA7P05543 415 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 BDKRB1P46663 353 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 CARSP49589 748 aaKnown RBP11.32□□□□□ -0.6
BRCA1-225ENST00000586385 RWDD2BP57060 319 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 ARG2P78540 354 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 NAA30Q147X3 362 aaPredicted RBP11.32□□□□□ -0.6
BRCA1-225ENST00000586385 CDSNQ15517 529 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 ZNF630Q2M218 657 aaPredicted RBP11.32□□□□□ -0.6
BRCA1-225ENST00000586385 FAM214AQ32MH5 1076 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 FBXO42Q6P3S6 717 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 AFTPHQ6ULP2 937 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 BNC2Q6ZN30 1099 aaPredicted RBP11.32□□□□□ -0.6
BRCA1-225ENST00000586385 KBTBD2Q8IY47 623 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 AMER3Q8N944 861 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 TTC29Q8NA56 475 aaPredicted RBP11.32□□□□□ -0.6
BRCA1-225ENST00000586385 OR2L3Q8NG85 312 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 OR2A1Q8NGT9 310 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 HMGCLL1Q8TB92 370 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 ZUFSPQ96AP4 578 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 MIEF2Q96C03 454 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms