RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 NPHS2Q9NP85 383 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 GPRC5BQ9NZH0 403 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 SPATA7Q9P0W8 599 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 ZNF624Q9P2J8 865 aaPredicted RBP12.27□□□□□ -0.45
VMP1-202ENST00000585847 OPTCQ9UBM4 332 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 FAM8A1Q9UBU6 413 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 POLG2Q9UHN1 485 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 PCTPQ9UKL6 214 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 COL27A1Q8IZC6 1860 aaPredicted RBP12.27□□□□□ -0.45
VMP1-202ENST00000585847 TRBV23OR9-2A0A075B6M9 112 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 TMEM8BA6NDV4 472 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 NEMP2A6NFY4 417 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 MYO1CO00159 1063 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 FLRT2O43155 660 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 ESRRBO95718 433 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 CEACAM1P13688 526 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 F3P13726 295 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 EPB42P16452 691 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 IDSP22304 550 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 ACADLP28330 430 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 EEF1DP29692 281 aaKnown RBP12.26□□□□□ -0.45
VMP1-202ENST00000585847 ADSLP30566 484 aaPredicted RBP12.26□□□□□ -0.45
VMP1-202ENST00000585847 GMPRP36959 345 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 SLC19A1P41440 591 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 GRK6P43250 576 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 INHBCP55103 352 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 UBE2IP63279 158 aaKnown RBP12.26□□□□□ -0.45
VMP1-202ENST00000585847 CLCQ05315 142 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 GGTA1PQ4G0N0 100 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 UNC50Q53HI1 259 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 ACAD11Q709F0 780 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 PARP9Q8IXQ6 854 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 SFRP1Q8N474 314 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 SLC37A2Q8TED4 501 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 ZFPM2Q8WW38 1151 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 RAD51AP1Q96B01 352 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 APOLD1Q96LR9 279 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 LRRC37BQ96QE4 947 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 INSM2Q96T92 566 aaPredicted RBP12.26□□□□□ -0.45
VMP1-202ENST00000585847 SLC29A3Q9BZD2 475 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 CD244Q9BZW8 370 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 PCBD2Q9H0N5 130 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 PSMD13Q9UNM6 376 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 ANGPTL3Q9Y5C1 460 aa12.26□□□□□ -0.45
VMP1-202ENST00000585847 A0A0G2JND7 137 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 OR52A4PA6NMU1 304 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 B4DGG1 531 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 E2F3O00716 465 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 CASC3O15234 703 aaKnown RBP12.25□□□□□ -0.45
VMP1-202ENST00000585847 CRCPO75575 148 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 ATP5HO75947 161 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 WDR47O94967 919 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 EBLN1P0CF75 366 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 UROSP10746 265 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 SPINK2P20155 84 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 CSRP1P21291 193 aaKnown RBP12.25□□□□□ -0.45
VMP1-202ENST00000585847 HALP42357 657 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 SLC6A12P48065 614 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 AQP5P55064 265 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 SUZ12Q15022 739 aaKnown RBP12.25□□□□□ -0.45
VMP1-202ENST00000585847 RPE65Q16518 533 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.25□□□□□ -0.45
VMP1-202ENST00000585847 CGB2Q6NT52 195 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 ZCCHC8Q6NZY4 707 aaKnown RBP12.25□□□□□ -0.45
VMP1-202ENST00000585847 DUS1LQ6P1R4 473 aaKnown RBP12.25□□□□□ -0.45
VMP1-202ENST00000585847 GPRIN3Q6ZVF9 776 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 ZNF771Q7L3S4 317 aaPredicted RBP12.25□□□□□ -0.45
VMP1-202ENST00000585847 TRPM8Q7Z2W7 1104 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 TBC1D21Q8IYX1 336 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 ARL14Q8N4G2 192 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 EXT2Q93063 718 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 NTMT1Q9BV86 223 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 DUSP23Q9BVJ7 150 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 TMEM120AQ9BXJ8 343 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 TRIT1Q9H3H1 467 aaKnown RBP12.25□□□□□ -0.45
VMP1-202ENST00000585847 SLC32A1Q9H598 525 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 MVB12BQ9H7P6 319 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 TMEM45AQ9NWC5 275 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 TRPS1Q9UHF7 1281 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 IKZF3Q9UKT9 509 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 DOLKQ9UPQ8 538 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 PDE10AQ9Y233 779 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 ANKRD12Q6UB98 2062 aa12.25□□□□□ -0.45
VMP1-202ENST00000585847 OR5K4A6NMS3 321 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 AZIN1O14977 448 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 PPM1DO15297 605 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 SERPINA6P08185 405 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 XRCC1P18887 633 aaPredicted RBP12.24□□□□□ -0.45
VMP1-202ENST00000585847 KCNC1P48547 511 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 PHKG1Q16816 387 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 SMU1Q2TAY7 513 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 C14orf28Q4W4Y0 310 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 PERM1Q5SV97 790 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 KANK2Q63ZY3 851 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 GUSBP11Q6P575 273 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 EPGNQ6UW88 154 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 C6orf89Q6UWU4 347 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 CCDC121Q6ZUS5 278 aa12.24□□□□□ -0.45
VMP1-202ENST00000585847 RBM12BQ8IXT5 1001 aaKnown RBP12.24□□□□□ -0.45
VMP1-202ENST00000585847 ZNF781Q8N8C0 355 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms