RNA–Protein interactions for RNA: ENST00000584538.1

USP22-211, Transcript of ubiquitin specific peptidase 22, human

TSL 4

Gene USP22, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP22-211	ENST00000584538	MSH2	P43246	934 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	ATP6V0D1	P61421	351 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	HSD11B2	P80365	405 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	TUBB3	Q13509	450 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	CSHL1	Q14406	222 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	GPR19	Q15760	415 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	ZNF425	Q6IV72	752 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	FOXR1	Q6PIV2	292 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	AGTRAP	Q6RW13	159 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	CCDC91	Q7Z6B0	441 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	KLHDC8A	Q8IYD2	350 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	PLD6	Q8N2A8	252 aa	Known RBP	11.42	□□□□□ -0.58
USP22-211	ENST00000584538	RAB42	Q8N4Z0	105 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	KDF1	Q8NAX2	398 aa	Predicted RBP	11.42	□□□□□ -0.58
USP22-211	ENST00000584538	OR56A3	Q8NH54	315 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	MCOLN3	Q8TDD5	553 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	EPS8L3	Q8TE67	593 aa	Known RBP	11.42	□□□□□ -0.58
USP22-211	ENST00000584538	UBLCP1	Q8WVY7	318 aa	Predicted RBP	11.42	□□□□□ -0.58
USP22-211	ENST00000584538	ZCCHC14	Q8WYQ9	949 aa	Known RBP	11.42	□□□□□ -0.58
USP22-211	ENST00000584538	USP7	Q93009	1102 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	KIAA1191	Q96A73	305 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	ZNF501	Q96CX3	271 aa	Predicted RBP	11.42	□□□□□ -0.58
USP22-211	ENST00000584538	CCDC138	Q96M89	665 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	ZNF578	Q96N58	590 aa	Predicted RBP	11.42	□□□□□ -0.58
USP22-211	ENST00000584538	TAAR9	Q96RI9	348 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	MIPEP	Q99797	713 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	TMEM79	Q9BSE2	394 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	CCDC86	Q9H6F5	360 aa	Known RBP	11.42	□□□□□ -0.58
USP22-211	ENST00000584538	AKAP7	Q9P0M2	348 aa	Predicted RBP	11.42	□□□□□ -0.58
USP22-211	ENST00000584538	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	11.42	□□□□□ -0.58
USP22-211	ENST00000584538	TAC3	Q9UHF0	121 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	AK5	Q9Y6K8	562 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	APC2	O95996	2303 aa		11.42	□□□□□ -0.58
USP22-211	ENST00000584538	ZNF839	A8K0R7	811 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	11.41	□□□□□ -0.58
USP22-211	ENST00000584538	KRT38	O76015	456 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	DLGAP3	O95886	979 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	CTSB	P07858	339 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	LTA4H	P09960	611 aa	Known RBP	11.41	□□□□□ -0.58
USP22-211	ENST00000584538	TFEB	P19484	476 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	GRIA3	P42263	894 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	GCGR	P47871	477 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	SLC6A12	P48065	614 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	KCNC1	P48547	511 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	RAB15	P59190	212 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	RASA2	Q15283	850 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	TGFBI	Q15582	683 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	DEFB110	Q30KQ9	67 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	TECRL	Q5HYJ1	363 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	ICE2	Q659A1	982 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	TIFAB	Q6ZNK6	161 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	RNF44	Q7L0R7	432 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	TAOK1	Q7L7X3	1001 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	ISCA2	Q86U28	154 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	PAQR7	Q86WK9	346 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	PROSER1	Q86XN7	944 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	TDRP	Q86YL5	185 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	SYTL1	Q8IYJ3	562 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	LSMEM2	Q8N112	164 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	DNAJC22	Q8N4W6	341 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	PDPR	Q8NCN5	879 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	SLC22A18	Q96BI1	424 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	RHBDF1	Q96CC6	855 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	NXNL1	Q96CM4	212 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	CNTNAP3B	Q96NU0	1288 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	OR4K3	Q96R72	315 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	OR6C1	Q96RD1	312 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	CTRC	Q99895	268 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	CNTNAP3	Q9BZ76	1288 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	CCDC177	Q9NQR7	707 aa	Predicted RBP	11.41	□□□□□ -0.58
USP22-211	ENST00000584538	ENAM	Q9NRM1	1142 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	THSD1	Q9NS62	852 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	FGF21	Q9NSA1	209 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.41	□□□□□ -0.58
USP22-211	ENST00000584538	SOHLH2	Q9NX45	425 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	ARL15	Q9NXU5	204 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	SLC39A1	Q9NY26	324 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	UTP6	Q9NYH9	597 aa	Known RBP	11.41	□□□□□ -0.58
USP22-211	ENST00000584538	LNPEP	Q9UIQ6	1025 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	PCDHB11	Q9Y5F2	797 aa		11.41	□□□□□ -0.58
USP22-211	ENST00000584538	MAP1B	P46821	2468 aa	Known RBP	11.41	□□□□□ -0.58
USP22-211	ENST00000584538	USP24	Q9UPU5	2620 aa		11.4	□□□□□ -0.58
USP22-211	ENST00000584538	CTSV	O60911	334 aa		11.4	□□□□□ -0.58
USP22-211	ENST00000584538	KERA	O60938	352 aa		11.4	□□□□□ -0.58
USP22-211	ENST00000584538	GUCA1C	O95843	209 aa		11.4	□□□□□ -0.58
USP22-211	ENST00000584538	SNRPA	P09012	282 aa	Known RBP	11.4	□□□□□ -0.58
USP22-211	ENST00000584538	MTHFD2	P13995	350 aa		11.4	□□□□□ -0.58
USP22-211	ENST00000584538	ZNF28	P17035	718 aa		11.4	□□□□□ -0.58
USP22-211	ENST00000584538	RBMS1	P29558	406 aa	Known RBP	11.4	□□□□□ -0.58
USP22-211	ENST00000584538	TYK2	P29597	1187 aa		11.4	□□□□□ -0.58
USP22-211	ENST00000584538	RPA3	P35244	121 aa	Predicted RBP	11.4	□□□□□ -0.58
USP22-211	ENST00000584538	ACY1	Q03154	408 aa		11.4	□□□□□ -0.58
USP22-211	ENST00000584538	C18orf21	Q32NC0	220 aa	Predicted RBP	11.4	□□□□□ -0.58
USP22-211	ENST00000584538	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
USP22-211	ENST00000584538	TAF1B	Q53T94	588 aa	Predicted RBP	11.4	□□□□□ -0.58
USP22-211	ENST00000584538	PRAMEF13	Q5VWM6	474 aa		11.4	□□□□□ -0.58
USP22-211	ENST00000584538	LCTL	Q6UWM7	567 aa		11.4	□□□□□ -0.58
USP22-211	ENST00000584538	RAPH1	Q70E73	1250 aa		11.4	□□□□□ -0.58
USP22-211	ENST00000584538	TBC1D1	Q86TI0	1168 aa	Predicted RBP	11.4	□□□□□ -0.58
USP22-211	ENST00000584538	DTX1	Q86Y01	620 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms