RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	COL28A1	Q2UY09	1125 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	PCGF3	Q3KNV8	242 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	DCAF4L1	Q3SXM0	396 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	LRIT3	Q3SXY7	679 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	FAM69B	Q5VUD6	431 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	GPR139	Q6DWJ6	353 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	NOTUM	Q6P988	496 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	QSOX2	Q6ZRP7	698 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	RBM43	Q6ZSC3	357 aa	Known RBP	3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	SLC24A5	Q71RS6	500 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	ZNF720	Q7Z2F6	126 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	HAUS6	Q7Z4H7	955 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	C12orf56	Q8IXR9	622 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	HACE1	Q8IYU2	909 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	TDH	Q8IZJ6	230 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	GUF1	Q8N442	669 aa	Known RBP	3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	RBMXL3	Q8N7X1	1067 aa	Known RBP	3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	POC5	Q8NA72	575 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	KCTD6	Q8NC69	237 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	DBF4B	Q8NFT6	615 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	LMO3	Q8TAP4	145 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	GOLGA5	Q8TBA6	731 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	SGCD	Q92629	289 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	BAD	Q92934	168 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	CCDC47	Q96A33	483 aa	Known RBP	3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	TMEM143	Q96AN5	459 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	DHX58	Q96C10	678 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	FBXL8	Q96CD0	374 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	PAGE5	Q96GU1	130 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	DUX5	Q96PT3	197 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	TEX12	Q9BXU0	123 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	FAM49A	Q9H0Q0	323 aa	Predicted RBP	3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	GOLPH3L	Q9H4A5	285 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	TMEM206	Q9H813	350 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	KIF9	Q9HAQ2	790 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	GIMAP4	Q9NUV9	329 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	TMEM161A	Q9NX61	479 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	TBC1D7	Q9P0N9	293 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	MARCH4	Q9P2E8	410 aa	Predicted RBP	3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	CTNNAL1	Q9UBT7	734 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	STK39	Q9UEW8	545 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	EXOC7	Q9UPT5	735 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	NFE2L3	Q9Y4A8	694 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	NFS1	Q9Y697	457 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	FAM169A	Q9Y6X4	670 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	UMODL1	Q5DID0	1318 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	ADGRA3	Q8IWK6	1321 aa		3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	TCF20	Q9UGU0	1960 aa	Known RBP	3.11	□□□□□ -1.91
MSI2-215	ENST00000582453	FRMPD3	Q5JV73	1810 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	KIAA0100	Q14667	2235 aa	Known RBP	3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	3.1	□□□□□ -1.91
MSI2-215	ENST00000582453		A0A1B0GUV1	79 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	PLSCR5	A0PG75	271 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	LRRIQ4	A6NIV6	560 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	SRRM3	A6NNA2	597 aa	Predicted RBP	3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	SMTNL1	A8MU46	457 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453		K7ERI5	159 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	PDXK	O00764	312 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	MAPK13	O15264	365 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	FAM189A1	O60320	539 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	ERLIN2	O94905	339 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	GJB5	O95377	273 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	STAG3L1	P0CL83	205 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	GHR	P10912	638 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	ETFA	P13804	333 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	ARF4	P18085	180 aa	Predicted RBP	3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	ACADL	P28330	430 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	CD52	P31358	61 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	PIGA	P37287	484 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	CCL23	P55773	120 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	KRTAP10-9	P60411	292 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	ASIC1	P78348	528 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	RPL36A	P83881	106 aa	Known RBP	3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	LRRC63	Q05C16	580 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	GRSF1	Q12849	480 aa	Known RBP eCLIP	3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	COASY	Q13057	564 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	MYBPH	Q13203	477 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	SNTA1	Q13424	505 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	PRPF4B	Q13523	1007 aa	Known RBP	3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	DHX34	Q14147	1143 aa	Known RBP	3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	ZRSR1	Q15695	479 aa	Known RBP	3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	NTRK2	Q16620	822 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	KLHL40	Q2TBA0	621 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	SGO1	Q5FBB7	561 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	XKR4	Q5GH76	650 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	HERC4	Q5GLZ8	1057 aa	Predicted RBP	3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	PPP6R3	Q5H9R7	873 aa	Predicted RBP	3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	ZNF658	Q5TYW1	1059 aa	Predicted RBP	3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	HIST2H2BC	Q6DN03	193 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	HIST2H2BD	Q6DRA6	164 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	FAM109B	Q6ICB4	259 aa	Predicted RBP	3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	LRRC8E	Q6NSJ5	796 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	SLC27A1	Q6PCB7	646 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	3.1	□□□□□ -1.91	3e-7	■□□□□ 10.9
MSI2-215	ENST00000582453	CATSPER4	Q7RTX7	472 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	TSPAN33	Q86UF1	283 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	NOXA1	Q86UR1	476 aa		3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	ZC3HC1	Q86WB0	502 aa	Known RBP	3.1	□□□□□ -1.91
MSI2-215	ENST00000582453	SFR1	Q86XK3	245 aa		3.1	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms