RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 C1orf105O95561 183 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 SLC35G4P0C7Q5 338 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 MYCLP1P12525 358 aaPredicted RBP9.02□□□□□ -0.97
SS18-220ENST00000582092 GNAZP19086 355 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 GPX3P22352 226 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 ME2P23368 584 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 HTR1BP28222 390 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 PDHA2P29803 388 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 MAT2AP31153 395 aaKnown RBP9.02□□□□□ -0.97
SS18-220ENST00000582092 HNF4AP41235 474 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 CASP2P42575 452 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 BDKRB1P46663 353 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 DHPSP49366 369 aaPredicted RBP9.02□□□□□ -0.97
SS18-220ENST00000582092 POLR2JP52435 117 aaKnown RBP9.02□□□□□ -0.97
SS18-220ENST00000582092 PNLIPRP1P54315 467 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 PSME3P61289 254 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 FOXK2Q01167 660 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 ZNF33BQ06732 778 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 PRKG2Q13237 762 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 LAPTM5Q13571 262 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 PTK2BQ14289 1009 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 NFE2L1Q14494 772 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 ABRAXAS2Q15018 415 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 AGERQ15109 404 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 IRF4Q15306 451 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 WSCD2Q2TBF2 565 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 AASDHQ4L235 1098 aaPredicted RBP9.02□□□□□ -0.97
SS18-220ENST00000582092 PDCD4Q53EL6 469 aaKnown RBP9.02□□□□□ -0.97
SS18-220ENST00000582092 PAGE2BQ5JRK9 111 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 C6orf136Q5SQH8 315 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 IL23RQ5VWK5 629 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 REP15Q6BDI9 236 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 KIAA1211LQ6NV74 962 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 LAYNQ6UX15 382 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 RIPOR1Q6ZS17 1223 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 RABEPKQ7Z6M1 372 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 GALNT13Q8IUC8 556 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 FBXO15Q8NCQ5 510 aaPredicted RBP9.02□□□□□ -0.97
SS18-220ENST00000582092 PPFIBP2Q8ND30 876 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 PHC3Q8NDX5 983 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 FBXO27Q8NI29 283 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 JADE3Q92613 823 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 CCDC124Q96CT7 223 aaKnown RBP9.02□□□□□ -0.97
SS18-220ENST00000582092 COX14Q96I36 57 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 CLPTM1LQ96KA5 538 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 PKP4Q99569 1192 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 HOPXQ9BPY8 73 aaPredicted RBP9.02□□□□□ -0.97
SS18-220ENST00000582092 C1orf50Q9BV19 199 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 C1QTNF2Q9BXJ5 285 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 DPY30Q9C005 99 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 ARRDC1-AS1Q9H2J1 176 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 TRIT1Q9H3H1 467 aaKnown RBP9.02□□□□□ -0.97
SS18-220ENST00000582092 OSGEPL1Q9H4B0 414 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 TUBB1Q9H4B7 451 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 SEMA4GQ9NTN9 838 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 C1orf109Q9NX04 203 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 ZIM2Q9NZV7 527 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 STOX2Q9P2F5 926 aaPredicted RBP9.02□□□□□ -0.97
SS18-220ENST00000582092 STOML1Q9UBI4 398 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 MBD1Q9UIS9 605 aaPredicted RBP9.02□□□□□ -0.97
SS18-220ENST00000582092 HCN2Q9UL51 889 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 TDRKHQ9Y2W6 561 aaKnown RBP9.02□□□□□ -0.97
SS18-220ENST00000582092 L3MBTL1Q9Y468 752 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 GPSM3Q9Y4H4 160 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 ASB1Q9Y576 335 aa9.02□□□□□ -0.97
SS18-220ENST00000582092 A0A088AWK7 358 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 TRIM38O00635 465 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 ENTPD5O75356 428 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 GMNNO75496 209 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 PDE5AO76074 875 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 PSMG1O95456 288 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 BAG2O95816 211 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 SOD1P00441 154 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 ALDOCP09972 364 aaKnown RBP9.01□□□□□ -0.97
SS18-220ENST00000582092 ZNF806P0C7X5 589 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 PRPS2P11908 318 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 PCNAP12004 261 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 JUPP14923 745 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 IDSP22304 550 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 AKT2P31751 481 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 CPOXP36551 454 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 MPLP40238 635 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 SLC6A12P48065 614 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 TAS2R38P59533 333 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 RPL38P63173 70 aaKnown RBP9.01□□□□□ -0.97
SS18-220ENST00000582092 NFYCQ13952 458 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 MAP7Q14244 749 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 GGTA1PQ4G0N0 100 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 XKR7Q5GH72 579 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 TCHHL1Q5QJ38 904 aaPredicted RBP9.01□□□□□ -0.97
SS18-220ENST00000582092 PMS2CLQ68D20 193 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 HACD2Q6Y1H2 254 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 PRR23CQ6ZRP0 262 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 CHST15Q7LFX5 561 aaPredicted RBP9.01□□□□□ -0.97
SS18-220ENST00000582092 ERMP1Q7Z2K6 904 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 DCUN1D3Q8IWE4 304 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 NETO1Q8TDF5 533 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 SLC26A7Q8TE54 656 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 SETD7Q8WTS6 366 aaKnown RBP9.01□□□□□ -0.97
SS18-220ENST00000582092 TFGQ92734 400 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms