RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 DNAJB14Q8TBM8 379 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 LKAAEAR1Q8TD35 194 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.15□□□□□ -0.78
RFFL-209ENST00000581265 ATG4AQ8WYN0 398 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 RAD51AP1Q96B01 352 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 VPS50Q96JG6 964 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 IL17FQ96PD4 163 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 SELENOSQ9BQE4 189 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 UNKQ9C0B0 810 aaKnown RBP10.15□□□□□ -0.78
RFFL-209ENST00000581265 SEMA3GQ9NS98 782 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 ANAPC5Q9UJX4 755 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 SLC39A10Q9ULF5 831 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 ENTPD4Q9Y227 616 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 TCAF1Q9Y4C2 921 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 CSAG2Q9Y5P2 127 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 SVILO95425 2214 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 PCM1Q15154 2024 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 E7EVH7 732 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 KPNA5O15131 536 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 CD3EAPO15446 510 aaKnown RBP10.14□□□□□ -0.79
RFFL-209ENST00000581265 CTSVO60911 334 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 C1orf105O95561 183 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 FTCDO95954 541 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 IFNB1P01574 187 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 PRF1P14222 555 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 MCM3P25205 808 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 OR1D4P47884 311 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 TTPAP49638 278 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 TLR1Q15399 786 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 PCID2Q5JVF3 399 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 WASHC2DQ5SRD0 308 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 B3GNTL1Q67FW5 361 aaPredicted RBP10.14□□□□□ -0.79
RFFL-209ENST00000581265 SP5Q6BEB4 398 aaPredicted RBP10.14□□□□□ -0.79
RFFL-209ENST00000581265 LDB1Q86U70 411 aaPredicted RBP10.14□□□□□ -0.79
RFFL-209ENST00000581265 PARP9Q8IXQ6 854 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 KRT222Q8N1A0 295 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 TXLNBQ8N3L3 684 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 OR2A1Q8NGT9 310 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 FAR1Q8WVX9 515 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 PANX3Q96QZ0 392 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 LMF1Q96S06 567 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 BAG1Q99933 345 aaPredicted RBP10.14□□□□□ -0.79
RFFL-209ENST00000581265 RAB11FIP5Q9BXF6 653 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 LHPPQ9H008 270 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 P2RY12Q9H244 342 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 CHRAC1Q9NRG0 131 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 RAB6BQ9NRW1 208 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 CATSPERZQ9NTU4 200 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 MARCH4Q9P2E8 410 aaPredicted RBP10.14□□□□□ -0.79
RFFL-209ENST00000581265 CTSFQ9UBX1 484 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 CIDEBQ9UHD4 219 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 TTC7AQ9ULT0 858 aaPredicted RBP10.14□□□□□ -0.79
RFFL-209ENST00000581265 NOVA2Q9UNW9 492 aaKnown RBP10.14□□□□□ -0.79
RFFL-209ENST00000581265 ZNF148Q9UQR1 794 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 MRFAP1Q9Y605 127 aa10.14□□□□□ -0.79
RFFL-209ENST00000581265 CELSR2Q9HCU4 2923 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 ZGRF1Q86YA3 2104 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 HYKKA2RU49 373 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 ALOX12BO75342 701 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 APRTP07741 180 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 CARSP49589 748 aaKnown RBP10.13□□□□□ -0.79
RFFL-209ENST00000581265 PER3P56645 1201 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 Q0VFX4 171 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 ZNF169Q14929 603 aaPredicted RBP10.13□□□□□ -0.79
RFFL-209ENST00000581265 TMED2Q15363 201 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 RBBP7Q16576 425 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 TUBB8Q3ZCM7 444 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 ATG9BQ674R7 924 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 PTRHD1Q6GMV3 140 aaKnown RBP10.13□□□□□ -0.79
RFFL-209ENST00000581265 RPUSD3Q6P087 351 aaKnown RBP10.13□□□□□ -0.79
RFFL-209ENST00000581265 PRMT9Q6P2P2 845 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 ISLR2Q6UXK2 745 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 SHISA6Q6ZSJ9 500 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 TAX1BP1Q86VP1 789 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 LRRC6Q86X45 466 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 TMEM139Q8IV31 216 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 MPP5Q8N3R9 675 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 RAB42Q8N4Z0 105 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 RNF10Q8N5U6 811 aaKnown RBP10.13□□□□□ -0.79
RFFL-209ENST00000581265 TTC29Q8NA56 475 aaPredicted RBP10.13□□□□□ -0.79
RFFL-209ENST00000581265 OR2L3Q8NG85 312 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 GSDMBQ8TAX9 411 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 GRHL3Q8TE85 626 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 SOX17Q9H6I2 414 aaPredicted RBP10.13□□□□□ -0.79
RFFL-209ENST00000581265 EPS8L2Q9H6S3 715 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 ZNF304Q9HCX3 659 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 TREX1Q9NSU2 369 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 POLQO75417 2590 aa10.13□□□□□ -0.79
RFFL-209ENST00000581265 IGLV3-12A0A075B6K2 115 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 LOC105369274A0A096LPK9 316 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 LOC102723532A0A0G2JNH3 316 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 A0A0U1RQJ8 604 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 A0A1W2PPV9 198 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 E2F3O00716 465 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 LRRTM2O43300 516 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 KLHL18O94889 574 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 HPP00738 406 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 EDN3P14138 238 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 ETS1P14921 441 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 RPS3P23396 243 aaKnown RBP eCLIP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms