RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 SLC35D3Q5M8T2 416 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 ADAMTSL4-AS1Q5T5F5 129 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 Q6ZSR9 355 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 MFN1Q8IWA4 741 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 MMD2Q8IY49 270 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 MAML2Q8IZL2 1156 aaPredicted RBP4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 LSMEM2Q8N112 164 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 RAB42Q8N4Z0 105 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 PI4KAP1Q8N8J0 262 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 BMPERQ8N8U9 685 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 DBF4BQ8NFT6 615 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 OR4K1Q8NGD4 311 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 OR2T6Q8NHC8 308 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 ROBO4Q8WZ75 1007 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 OTUB1Q96FW1 271 aaPredicted RBP4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 CNDP2Q96KP4 475 aaKnown RBP4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 MUS81Q96NY9 551 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 PRRG4Q9BZD6 226 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 SHARPINQ9H0F6 387 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 ATP13A3Q9H7F0 1226 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 PLCXD1Q9NUJ7 323 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 C5AR2Q9P296 337 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 WDR83OSQ9Y284 106 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 MSGN1A6NI15 193 aa4.01□□□□□ -1.77
SMCHD1-204ENST00000581226 A8MXE2 369 aa4.01□□□□□ -1.77
SMCHD1-204ENST00000581226 EPHB6O15197 1021 aa4.01□□□□□ -1.77
SMCHD1-204ENST00000581226 LCN1P1Q5VSP4 162 aa4.01□□□□□ -1.77
SMCHD1-204ENST00000581226 MRPS27Q92552 414 aaKnown RBP4.01□□□□□ -1.77
SMCHD1-204ENST00000581226 ARHGAP45Q92619 1136 aa4.01□□□□□ -1.77
SMCHD1-204ENST00000581226 FAM71F1Q96KD3 344 aaPredicted RBP4.01□□□□□ -1.77
SMCHD1-204ENST00000581226 ZNF558Q96NG5 402 aa4.01□□□□□ -1.77
SMCHD1-204ENST00000581226 LRRC3BQ96PB8 259 aa4.01□□□□□ -1.77
SMCHD1-204ENST00000581226 FUCA2Q9BTY2 467 aa4.01□□□□□ -1.77
SMCHD1-204ENST00000581226 ANKRD2Q9GZV1 360 aa4.01□□□□□ -1.77
SMCHD1-204ENST00000581226 FAM49AQ9H0Q0 323 aaPredicted RBP4.01□□□□□ -1.77
SMCHD1-204ENST00000581226 TLE6Q9H808 572 aa4.01□□□□□ -1.77
SMCHD1-204ENST00000581226 CCDC177Q9NQR7 707 aaPredicted RBP4.01□□□□□ -1.77
SMCHD1-204ENST00000581226 OR6C2Q9NZP2 312 aa4.01□□□□□ -1.77
SMCHD1-204ENST00000581226 RASAL2Q9UJF2 1139 aa4.01□□□□□ -1.77
SMCHD1-204ENST00000581226 GLRA3O75311 464 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 KHDRBS3O75525 346 aaKnown RBP4□□□□□ -1.77
SMCHD1-204ENST00000581226 SERPINB2P05120 415 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 FYNP06241 537 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 CSN3P07498 182 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 ERCC2P18074 760 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 ALDH3A2P51648 485 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 CAMK2DQ13557 499 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 TNIP1Q15025 636 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 SGSM1Q2NKQ1 1148 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 KRTAP27-1Q3LI81 207 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 XKR6Q5GH73 641 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 ZC2HC1BQ5TFG8 222 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 TMEM207Q6UWW9 146 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 G2E3Q7L622 706 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 CHST3Q7LGC8 479 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 LACC1Q8IV20 430 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 NDUFAF2Q8N183 169 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 OR5AP2Q8NGF4 316 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 VPS33AQ96AX1 596 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 SPSB1Q96BD6 273 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 ZNF653Q96CK0 615 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 CCDC3Q9BQI4 270 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 SLC2A11Q9BYW1 496 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 ZMYND12Q9H0C1 365 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 Q9H8V8 135 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 CHST11Q9NPF2 352 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 KLHL8Q9P2G9 620 aaPredicted RBP4□□□□□ -1.77
SMCHD1-204ENST00000581226 FRMD4AQ9P2Q2 1039 aaPredicted RBP4□□□□□ -1.77
SMCHD1-204ENST00000581226 EPHA6Q9UF33 1036 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 WDR37Q9Y2I8 494 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 CCL27Q9Y4X3 112 aa4□□□□□ -1.77
SMCHD1-204ENST00000581226 TCERG1O14776 1098 aaKnown RBP3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 AP5Z1O43299 807 aa3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 CDK2AP2O75956 126 aa3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 HSP90AA1P07900 732 aaKnown RBP3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 ZNF883P0CG24 379 aa3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 HSPA4P34932 840 aa3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 SLC6A12P48065 614 aa3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 HILS1P60008 231 aa3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 IRX1P78414 480 aaPredicted RBP3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 PTAR1Q7Z6K3 402 aaPredicted RBP3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 TLK2Q86UE8 772 aa3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 HOGA1Q86XE5 327 aa3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 RYBPQ8N488 228 aaPredicted RBP3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 DCLK2Q8N568 766 aa3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 CAMKVQ8NCB2 501 aa3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 GPRC5AQ8NFJ5 357 aa3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 VANGL1Q8TAA9 524 aaPredicted RBP3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 PROX1Q92786 737 aa3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 ERP27Q96DN0 273 aa3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 SERINC2Q96SA4 455 aa3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 CLEC7AQ9BXN2 247 aa3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 MTMR12Q9C0I1 747 aa3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 OR10A4Q9H209 315 aa3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 RNF186Q9NXI6 227 aa3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 BARHL2Q9NY43 387 aa3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 TMEM181Q9P2C4 612 aa3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 TXNDC16Q9P2K2 825 aa3.99□□□□□ -1.77
SMCHD1-204ENST00000581226 NFKBIL1Q9UBC1 381 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms