RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 SARM1Q6SZW1 724 aa7.29□□□□□ -1.24
SMARCE1-217ENST00000580654 HOOK3Q86VS8 718 aa7.29□□□□□ -1.24
SMARCE1-217ENST00000580654 TMTC1Q8IUR5 882 aa7.29□□□□□ -1.24
SMARCE1-217ENST00000580654 MCATQ8IVS2 390 aaKnown RBP7.29□□□□□ -1.24
SMARCE1-217ENST00000580654 EID3Q8N140 333 aa7.29□□□□□ -1.24
SMARCE1-217ENST00000580654 BEST3Q8N1M1 668 aa7.29□□□□□ -1.24
SMARCE1-217ENST00000580654 MIEF2Q96C03 454 aa7.29□□□□□ -1.24
SMARCE1-217ENST00000580654 IMP4Q96G21 291 aaKnown RBP7.29□□□□□ -1.24
SMARCE1-217ENST00000580654 SEC16BQ96JE7 1060 aa7.29□□□□□ -1.24
SMARCE1-217ENST00000580654 IMMP1LQ96LU5 166 aa7.29□□□□□ -1.24
SMARCE1-217ENST00000580654 NPAS2Q99743 824 aa7.29□□□□□ -1.24
SMARCE1-217ENST00000580654 PARVAQ9NVD7 372 aa7.29□□□□□ -1.24
SMARCE1-217ENST00000580654 SMOXQ9NWM0 555 aa7.29□□□□□ -1.24
SMARCE1-217ENST00000580654 ANKRD10Q9NXR5 420 aa7.29□□□□□ -1.24
SMARCE1-217ENST00000580654 IGLV3-12A0A075B6K2 115 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 LOC102723996A0A087X1L8 192 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 GLYATL1P3A0A0U1RQE8 302 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 SLC35F4A4IF30 521 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 KCNK1O00180 336 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 BUD23O43709 281 aaKnown RBP7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 GADD45BO75293 160 aaPredicted RBP7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 UQCRHP07919 91 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 MYBL2P10244 700 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 MSH3P20585 1137 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 MAGP20916 626 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 EEF1DP29692 281 aaKnown RBP7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 AKT1P31749 480 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 CD96P40200 585 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 NUP107P57740 925 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 GBE1Q04446 702 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 SLC10A2Q12908 348 aaPredicted RBP7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 PTPRCAPQ14761 206 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 PPP2R5EQ16537 467 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 BOLA3Q53S33 107 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 EMC4Q5J8M3 183 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 ERICH6BQ5W0A0 696 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 FCRLBQ6BAA4 426 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 TMEM211Q6ICI0 200 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 SPINK14Q6IE38 97 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 GALNTL5Q7Z4T8 443 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 CLYBLQ8N0X4 340 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 SPATA22Q8NHS9 363 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 FAM71BQ8TC56 605 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 HM13Q8TCT9 377 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 RND1Q92730 232 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 ZNF285Q96NJ3 590 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 SYT11Q9BT88 431 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 CEP41Q9BYV8 373 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 ZNF700Q9H0M5 742 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 MVB12BQ9H7P6 319 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 COG4Q9H9E3 785 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 DMRT3Q9NQL9 472 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 RIC8BQ9NVN3 520 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 ZNF282Q9UDV7 671 aaPredicted RBP7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 MKL2Q9ULH7 1088 aa7.28□□□□□ -1.24
SMARCE1-217ENST00000580654 A0A1B0GTH9 108 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 FITM1A5D6W6 292 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 KLHL33A6NCF5 533 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 A6NNC1 897 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 TMCO5BA8MYB1 307 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 IDSB3KWA1 339 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 H7C1Q1 480 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 FFAR3O14843 346 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 GPR42O15529 346 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 NDST3O95803 873 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 HSP90AA1P07900 732 aaKnown RBP7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 SHMT2P34897 504 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 PTGS2P35354 604 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 GRIA3P42263 894 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 CD151P48509 253 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 PRLHRP49683 370 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 NR0B1P51843 470 aaKnown RBP7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 EMP2P54851 167 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 NKX6-1P78426 367 aaPredicted RBP7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 IFI35P80217 286 aaPredicted RBP7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 SLC25A11Q02978 314 aaKnown RBP7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 OCA2Q04671 838 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 PMPCAQ10713 525 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 ITGA9Q13797 1035 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 FASTKQ14296 549 aaKnown RBP7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 GRM7Q14831 915 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 OR1C1Q15619 314 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 ACER2Q5QJU3 275 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 CCDC183Q5T5S1 534 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 YOD1Q5VVQ6 348 aaPredicted RBP7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 DESI1Q6ICB0 168 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 H3F3CQ6NXT2 135 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 KDELC1Q6UW63 502 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 ARSKQ6UWY0 536 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 LIX1LQ8IVB5 337 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 LMNTD1Q8N9Z9 388 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 OR5AR1Q8NGP9 310 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 GOT1L1Q8NHS2 421 aaPredicted RBP7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 ZNF398Q8TD17 642 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 DENND1AQ8TEH3 1009 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 TFGQ92734 400 aaPredicted RBP7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 ZNF304Q9HCX3 659 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 IL1RAPL1Q9NZN1 696 aa7.27□□□□□ -1.25
SMARCE1-217ENST00000580654 CRIM1Q9NZV1 1036 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms