RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 CCDC77Q9BR77 488 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 SCNM1Q9BWG6 230 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 MOV10L1Q9BXT6 1211 aaKnown RBP3.03□□□□□ -1.92
KPNB1-208ENST00000580019 NFKBIZQ9BYH8 718 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 CCSER1Q9C0I3 900 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 TMEM39BQ9GZU3 492 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 NAPBQ9H115 298 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 RPAP3Q9H6T3 665 aaPredicted RBP3.03□□□□□ -1.92
KPNB1-208ENST00000580019 RMND5AQ9H871 391 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 GAR1Q9NY12 217 aaKnown RBP3.03□□□□□ -1.92
KPNB1-208ENST00000580019 DPP3Q9NY33 737 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 TFCP2L1Q9NZI6 479 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 CFAP45Q9UL16 551 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 TRAF3IP3Q9Y228 551 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 CLIC4Q9Y696 253 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 GPATCH8Q9UKJ3 1502 aaKnown RBP3.03□□□□□ -1.92
KPNB1-208ENST00000580019 ATP10DQ9P241 1426 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 CDC42BPBQ9Y5S2 1711 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 MYOM1P52179 1685 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 EMSYQ7Z589 1322 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 FAM90A10PA6NDY2 464 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 HSPB2A8KAH6 182 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 TLR4O00206 839 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 CLIC1O00299 241 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 SOCS6O14544 535 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 CTDSPLO15194 276 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 CTAGE5O15320 804 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 RNMTO43148 476 aaKnown RBP3.02□□□□□ -1.93
KPNB1-208ENST00000580019 FCGR3BO75015 233 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 ATP9AO75110 1047 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 ATP2C2O75185 946 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 NME6O75414 186 aaPredicted RBP3.02□□□□□ -1.93
KPNB1-208ENST00000580019 CREG1O75629 220 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 BBOX1O75936 387 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 C9P02748 559 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 LCATP04180 440 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 ICAM1P05362 532 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 CD63P08962 238 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 RAB40ALP0C0E4 278 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 AKR1A1P14550 325 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 MYL6BP14649 208 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 SRD5A1P18405 259 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 UBA1P22314 1058 aaKnown RBP3.02□□□□□ -1.93
KPNB1-208ENST00000580019 MPGP29372 298 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 PKLRP30613 574 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 OTX2P32243 289 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 SLC6A12P48065 614 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 RGS7P49802 495 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 GMPSP49915 693 aaPredicted RBP3.02□□□□□ -1.93
KPNB1-208ENST00000580019 CLCN5P51795 746 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 CLCNKBP51801 687 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 HNRNPFP52597 415 aaKnown RBP3.02□□□□□ -1.93
KPNB1-208ENST00000580019 SMSP52788 366 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 COPB1P53618 953 aaKnown RBP3.02□□□□□ -1.93
KPNB1-208ENST00000580019 ATP5IP56385 69 aaPredicted RBP3.02□□□□□ -1.93
KPNB1-208ENST00000580019 IRX4P78413 519 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 CDK3Q00526 305 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 ARHGAP1Q07960 439 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 GRIK2Q13002 908 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 DDX39BQ13838 428 aaKnown RBP3.02□□□□□ -1.93
KPNB1-208ENST00000580019 IDI1Q13907 227 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 GALNT3Q14435 633 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 MFSD13AQ14CX5 517 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 ARHGEF6Q15052 776 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 HSPB2Q16082 182 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 TPD52L1Q16890 204 aaPredicted RBP3.02□□□□□ -1.93
KPNB1-208ENST00000580019 NADK2Q4G0N4 442 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 TMEM119Q4V9L6 283 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 EPC2Q52LR7 807 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 PLEKHO1Q53GL0 409 aaPredicted RBP3.02□□□□□ -1.93
KPNB1-208ENST00000580019 TDRD12Q587J7 1177 aaKnown RBP3.02□□□□□ -1.93
KPNB1-208ENST00000580019 PLAC9Q5JTB6 97 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 CYP4A22Q5TCH4 519 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 TBC1D9BQ66K14 1250 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 SIGIRRQ6IA17 410 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 NCAPH2Q6IBW4 605 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 PLEKHA7Q6IQ23 1121 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 PODNL1Q6PEZ8 512 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 PAPD4Q6PIY7 484 aaKnown RBP3.02□□□□□ -1.93
KPNB1-208ENST00000580019 FBXO46Q6PJ61 603 aaPredicted RBP3.02□□□□□ -1.93
KPNB1-208ENST00000580019 DHRS13Q6UX07 377 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 RANBP10Q6VN20 620 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 LINGO2Q7L985 606 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 WDR53Q7Z5U6 358 aaPredicted RBP3.02□□□□□ -1.93
KPNB1-208ENST00000580019 NOXA1Q86UR1 476 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 GPR180Q86V85 440 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 IGFN1Q86VF2 1251 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 CAMK1DQ8IU85 385 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 ZDHHC23Q8IYP9 409 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 TMEM217Q8N7C4 229 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 MNS1Q8NEH6 495 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 OR4N2Q8NGD1 307 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 OR6C4Q8NGE1 309 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 OR52N4Q8NGI2 321 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 OR10T2Q8NGX3 314 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 GPT2Q8TD30 523 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 SLC20A1Q8WUM9 679 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 ADAMTS14Q8WXS8 1223 aa3.02□□□□□ -1.93
KPNB1-208ENST00000580019 ATOH1Q92858 354 aaPredicted RBP3.02□□□□□ -1.93
KPNB1-208ENST00000580019 SLC25A28Q96A46 364 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms