RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 ITM2AO43736 263 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 UGDHO60701 494 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 EDF1O60869 148 aaKnown RBP10.38□□□□□ -0.75
SS18-213ENST00000579640 FKBP9O95302 570 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 CHRM5P08912 532 aaPredicted RBP10.38□□□□□ -0.75
SS18-213ENST00000579640 PNLIPP16233 465 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 GNAZP19086 355 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 GPR3P46089 330 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 CCNG1P51959 295 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 HK2P52789 917 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 ABATP80404 500 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 SLC14A1Q13336 389 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 TSTA3Q13630 321 aaPredicted RBP10.38□□□□□ -0.75
SS18-213ENST00000579640 NR0B2Q15466 257 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 CSRP2Q16527 193 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 THEMIS2Q5TEJ8 643 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 GPRIN3Q6ZVF9 776 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 ZNF438Q7Z4V0 828 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 CUZD1Q86UP6 607 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 OOSP2Q86WS3 158 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 LSMEM2Q8N112 164 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 CHCHD4Q8N4Q1 142 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 AFAP1L2Q8N4X5 818 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 OR2I1PQ8NGU4 316 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 MOCOSQ96EN8 888 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 SORT1Q99523 831 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 NSRP1Q9H0G5 558 aaKnown RBP10.38□□□□□ -0.75
SS18-213ENST00000579640 MID1IP1Q9NPA3 183 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 ACSS2Q9NR19 701 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 SEMA4GQ9NTN9 838 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 PADI4Q9UM07 663 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 A0A1W2PPV9 198 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 PIPSLA2A3N6 862 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 OR7A17O14581 309 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 FLRT2O43155 660 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 SIGLEC6O43699 453 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 PRICKLE3O43900 615 aaPredicted RBP10.37□□□□□ -0.75
SS18-213ENST00000579640 LYPLA1O75608 230 aaPredicted RBP10.37□□□□□ -0.75
SS18-213ENST00000579640 ESRRBO95718 433 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 ENO1P06733 434 aaKnown RBP10.37□□□□□ -0.75
SS18-213ENST00000579640 CHRNGP07510 517 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 EBLN1P0CF75 366 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 NPPBP16860 134 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 ARRB2P32121 409 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 GRK6P43250 576 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 DUSP3P51452 185 aaPredicted RBP10.37□□□□□ -0.75
SS18-213ENST00000579640 SPEM2Q0P670 501 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 NR1D2Q14995 579 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 SUSD1Q6UWL2 747 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 DBX2Q6ZNG2 339 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 FAM47EQ6ZV65 393 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 RPS27LQ71UM5 84 aaKnown RBP10.37□□□□□ -0.75
SS18-213ENST00000579640 MILR1Q7Z6M3 343 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 C17orf64Q86WR6 236 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 ADGRF3Q8IZF5 1079 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 EID2Q8N6I1 236 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 AGAP11Q8TF27 550 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 SLC5A11Q8WWX8 675 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 GRAMD1AQ96CP6 724 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 APOLD1Q96LR9 279 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 OR4K3Q96R72 315 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 C20orf27Q9GZN8 174 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 EHD1Q9H4M9 534 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 SLCO1B3Q9NPD5 702 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 LRIT1Q9P2V4 623 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 TAC3Q9UHF0 121 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 TRPS1Q9UHF7 1281 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 RNF215Q9Y6U7 377 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 OR6C74A6NCV1 312 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 OR5K3A6NET4 321 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 C2orf74A8MZ97 194 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 SLCO1B7G3V0H7 640 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 BTN3A3O00478 584 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 UBFD1O14562 309 aaKnown RBP10.37□□□□□ -0.75
SS18-213ENST00000579640 UBXN7O94888 489 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 TGDSO95455 350 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 CLDN9O95484 217 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 FGF4P08620 206 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 AMD1P17707 334 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 TSPAN8P19075 237 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 EPORP19235 508 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 HRH2P25021 359 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 CASP2P42575 452 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 CCR10P46092 362 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 RPL14P50914 215 aaKnown RBP10.37□□□□□ -0.75
SS18-213ENST00000579640 SH3BP2P78314 561 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 PRDX1Q06830 199 aaKnown RBP10.37□□□□□ -0.75
SS18-213ENST00000579640 TRAF3Q13114 568 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 E2F2Q14209 437 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 NAA25Q14CX7 972 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 SF3A2Q15428 464 aaKnown RBP10.37□□□□□ -0.75
SS18-213ENST00000579640 TBCCQ15814 346 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 GGTA1PQ4G0N0 100 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 LIPJQ5W064 366 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 ICE2Q659A1 982 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 ARMC6Q6NXE6 501 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 LRRC34Q8IZ02 419 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 C2orf73Q8N5S3 287 aaPredicted RBP10.37□□□□□ -0.75
SS18-213ENST00000579640 LMNTD1Q8N9Z9 388 aa10.37□□□□□ -0.75
SS18-213ENST00000579640 OR52B6Q8NGF0 335 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms