RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 KIAA1614Q5VZ46 1190 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 SPESP1Q6UW49 350 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 ZFAND4Q86XD8 727 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 TMEM151BQ8IW70 566 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 RBM12BQ8IXT5 1001 aaKnown RBP7.63□□□□□ -1.19
CCDC40-215ENST00000576033 LRRC56Q8IYG6 542 aaPredicted RBP7.63□□□□□ -1.19
CCDC40-215ENST00000576033 CENPLQ8N0S6 344 aaPredicted RBP7.63□□□□□ -1.19
CCDC40-215ENST00000576033 SHISA5Q8N114 240 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 PLD6Q8N2A8 252 aaKnown RBP7.63□□□□□ -1.19
CCDC40-215ENST00000576033 FBXO39Q8N4B4 442 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 OR9A1PQ8NGU1 263 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 ZNF480Q8WV37 535 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 KCTD4Q8WVF5 259 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 CKAP2Q8WWK9 683 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 ASB11Q8WXH4 323 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 CDKL2Q92772 493 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 USP7Q93009 1102 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 PYCR2Q96C36 320 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 MTBPQ96DY7 904 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 TMEM74Q96NL1 305 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 SELENOSQ9BQE4 189 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 TWSG1Q9GZX9 223 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 ATG10Q9H0Y0 220 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 GPAMQ9HCL2 828 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 SNX15Q9NRS6 342 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 IGSF5Q9NSI5 407 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 CUEDC1Q9NWM3 386 aaPredicted RBP7.63□□□□□ -1.19
CCDC40-215ENST00000576033 STOX2Q9P2F5 926 aaPredicted RBP7.63□□□□□ -1.19
CCDC40-215ENST00000576033 PDP2Q9P2J9 529 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 B3GALT1Q9Y5Z6 326 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 COMMD10Q9Y6G5 202 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 KNTC1P50748 2209 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 HEATR5BQ9P2D3 2071 aa7.63□□□□□ -1.19
CCDC40-215ENST00000576033 MGAQ8IWI9 3026 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 PCSK5Q92824 1860 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 ATMQ13315 3056 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 TLCD2A6NGC4 264 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 LRRC14BA6NHZ5 514 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 GFYI3L273 518 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 TM9SF1O15321 606 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 PRICKLE3O43900 615 aaPredicted RBP7.62□□□□□ -1.19
CCDC40-215ENST00000576033 RFPL1O75677 317 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 KRT37O76014 449 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 ZWINTO95229 277 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 SNRPAP09012 282 aaKnown RBP7.62□□□□□ -1.19
CCDC40-215ENST00000576033 JMJD7P0C870 316 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 CCDC166P0CW27 439 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 ERGP11308 486 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 CD1DP15813 335 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 KRT15P19012 456 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 CDH3P22223 829 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 NDUFS1P28331 727 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 SLC5A2P31639 672 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 SHMT2P34897 504 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 GRIA3P42263 894 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 ETV4P43268 484 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 GLRBP48167 497 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 KCNC1P48547 511 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 SEC24CP53992 1094 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 PNLIPRP1P54315 467 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 FOXM1Q08050 763 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 RTP5Q14D33 572 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 ZSCAN26Q16670 478 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 GRTP1Q5TC63 336 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 FAM69BQ5VUD6 431 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 FCRL6Q6DN72 434 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 CDHR3Q6ZTQ4 885 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 RAPH1Q70E73 1250 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 PRSS42Q7Z5A4 293 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 VASH2Q86V25 355 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 PLXDC1Q8IUK5 500 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 PLD3Q8IV08 490 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 MYO1HQ8N1T3 1032 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 C19orf47Q8N9M1 422 aaKnown RBP7.62□□□□□ -1.19
CCDC40-215ENST00000576033 OR2L8Q8NGY9 312 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 WDR36Q8NI36 951 aaKnown RBP7.62□□□□□ -1.19
CCDC40-215ENST00000576033 WDR48Q8TAF3 677 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 BCAS4Q8TDM0 211 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 KLHL6Q8WZ60 621 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 ESAMQ96AP7 390 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 NXNL1Q96CM4 212 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 NXPE2Q96DL1 559 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 CHMP6Q96FZ7 201 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 MED8Q96G25 268 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 APOPT1Q96IL0 206 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 DCBLD2Q96PD2 775 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 TRAPPC9Q96Q05 1148 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 OR6C1Q96RD1 312 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 SMC6Q96SB8 1091 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 CCT8L2Q96SF2 557 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 TMEM79Q9BSE2 394 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 STRADBQ9C0K7 418 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 SPNS1Q9H2V7 528 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 ZNF768Q9H5H4 540 aaKnown RBP7.62□□□□□ -1.19
CCDC40-215ENST00000576033 POLR1BQ9H9Y6 1135 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 ACSS2Q9NR19 701 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 STARD5Q9NSY2 213 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 WDR70Q9NW82 654 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 SOHLH2Q9NX45 425 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 TXNDC16Q9P2K2 825 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms