RNA–Protein interactions for RNA: ENST00000575815.5

NCBP3-205, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 4,096 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-205ENST00000575815 TNFAIP8L3Q5GJ75 292 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 IER5LQ5T953 404 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 ANKRD26P1Q6NSI1 321 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 LETMD1Q6P1Q0 360 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 USP53Q70EK8 1073 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 SPATA19Q7Z5L4 167 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 ZC3H7AQ8IWR0 971 aaKnown RBP8.13□□□□□ -1.11
NCBP3-205ENST00000575815 TRIML2Q8N7C3 387 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 Q8N9G6 341 aaPredicted RBP8.13□□□□□ -1.11
NCBP3-205ENST00000575815 IL17RCQ8NAC3 791 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 NCSTNQ92542 709 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 HSPA12BQ96MM6 686 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 ATOH8Q96SQ7 321 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 GSDMCQ9BYG8 508 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 ING2Q9H160 280 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 EQTNQ9NQ60 294 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 HRASLS2Q9NWW9 162 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 SERGEFQ9UGK8 458 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 APOBEC3BQ9UH17 382 aaKnown RBP8.13□□□□□ -1.11
NCBP3-205ENST00000575815 PSME2Q9UL46 239 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 SUFUQ9UMX1 484 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 MANBAO00462 879 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 SEPHS1P49903 392 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 ERVK-8P63133 956 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 IRX1P78414 480 aaPredicted RBP8.13□□□□□ -1.11
NCBP3-205ENST00000575815 MRPS21P82921 87 aaKnown RBP8.13□□□□□ -1.11
NCBP3-205ENST00000575815 DOC2AQ14183 400 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 KRT72Q14CN4 511 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 C6orf136Q5SQH8 315 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 KLHL35Q6PF15 583 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 AGAP11Q8TF27 550 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 SLC45A3Q96JT2 553 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 SORT1Q99523 831 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 PKP4Q99569 1192 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 IL21RQ9HBE5 538 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 ACSL5Q9ULC5 683 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 FEZF1A0PJY2 475 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 RTCAO00442 366 aaKnown RBP8.13□□□□□ -1.11
NCBP3-205ENST00000575815 LAMTOR5O43504 91 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 CISD3P0C7P0 127 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 AOAHP28039 575 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 TNFRSF4P43489 277 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 MTPNP58546 118 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 TEAD4Q15561 434 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 SLC14A2Q15849 920 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 SPRED3Q2MJR0 410 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 KIAA1161Q6NSJ0 714 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 LRRC70Q7Z2Q7 622 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 RNF175Q8N4F7 328 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 FRS2Q8WU20 508 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 CYGBQ8WWM9 190 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 RHBDF1Q96CC6 855 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 NSMCE3Q96MG7 304 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 NUSAP1Q9BXS6 441 aaKnown RBP8.13□□□□□ -1.11
NCBP3-205ENST00000575815 NLNQ9BYT8 704 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 GSTO2Q9H4Y5 243 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 ATAD3AQ9NVI7 634 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 PCTPQ9UKL6 214 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 PLEKHM1Q9Y4G2 1056 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 THSD7BQ9C0I4 1608 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 PIPSLA2A3N6 862 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 GLOD5A6NK44 160 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 PSMD11O00231 422 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 ERI3O43414 337 aaKnown RBP8.13□□□□□ -1.11
NCBP3-205ENST00000575815 SNNO75324 88 aaPredicted RBP8.13□□□□□ -1.11
NCBP3-205ENST00000575815 EBLN1P0CF75 366 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 RPS3P23396 243 aaKnown RBP eCLIP8.13□□□□□ -1.11
NCBP3-205ENST00000575815 TLX1P31314 330 aaPredicted RBP8.13□□□□□ -1.11
NCBP3-205ENST00000575815 TPMTP51580 245 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 CCR8P51685 355 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 SUOXP51687 545 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 CLCN7P51798 805 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 PNLIPRP1P54315 467 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 CATSPEREQ5SY80 951 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 CGB2Q6NT52 195 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 FAM180BQ6P0A1 224 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 TRIM40Q6P9F5 258 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 AMIGO2Q86SJ2 522 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 OR2T34Q8NGX1 318 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 SLC5A11Q8WWX8 675 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 RTKNQ9BST9 563 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 EFCAB11Q9BUY7 163 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 PCDHAC1Q9H158 963 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 LRMDAQ9H2I8 198 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 DENND2DQ9H6A0 471 aaPredicted RBP8.13□□□□□ -1.11
NCBP3-205ENST00000575815 DTNAQ9Y4J8 743 aa8.13□□□□□ -1.11
NCBP3-205ENST00000575815 UNC13CQ8NB66 2214 aa8.12□□□□□ -1.11
NCBP3-205ENST00000575815 NDUFS4O43181 175 aa8.12□□□□□ -1.11
NCBP3-205ENST00000575815 PCDH7O60245 1069 aa8.12□□□□□ -1.11
NCBP3-205ENST00000575815 HSPB3Q12988 150 aa8.12□□□□□ -1.11
NCBP3-205ENST00000575815 SMAD4Q13485 552 aaKnown RBP8.12□□□□□ -1.11
NCBP3-205ENST00000575815 MINDY4Q4G0A6 757 aa8.12□□□□□ -1.11
NCBP3-205ENST00000575815 CCSMST1Q4G0I0 132 aa8.12□□□□□ -1.11
NCBP3-205ENST00000575815 KHDC1Q4VXA5 237 aaKnown RBP8.12□□□□□ -1.11
NCBP3-205ENST00000575815 FAM219BQ5XKK7 198 aa8.12□□□□□ -1.11
NCBP3-205ENST00000575815 SLC22A15Q8IZD6 547 aa8.12□□□□□ -1.11
NCBP3-205ENST00000575815 OR6Y1Q8NGX8 325 aa8.12□□□□□ -1.11
NCBP3-205ENST00000575815 OTULINQ96BN8 352 aa8.12□□□□□ -1.11
NCBP3-205ENST00000575815 MRGPRX1Q96LB2 322 aa8.12□□□□□ -1.11
NCBP3-205ENST00000575815 ZNF382Q96SR6 550 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms