RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 DNAJC21Q5F1R6 531 aaKnown RBP9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 WASHC2DQ5SRD0 308 aa9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 KCTD11Q693B1 232 aa9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 PRMT9Q6P2P2 845 aa9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 RIPOR1Q6ZS17 1223 aa9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 LUZP1Q86V48 1076 aa9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 SLC22A15Q8IZD6 547 aa9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 C2orf73Q8N5S3 287 aaPredicted RBP9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 SIRT6Q8N6T7 355 aa9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 LMNTD1Q8N9Z9 388 aa9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 TTC29Q8NA56 475 aaPredicted RBP9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 OR2L8Q8NGY9 312 aa9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 STYXQ8WUJ0 223 aa9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 C14orf79Q96F83 325 aa9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 CHP1Q99653 195 aa9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 SELENOSQ9BQE4 189 aa9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 RNF32Q9H0A6 362 aa9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 OCEL1Q9H607 264 aa9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 SPTLC3Q9NUV7 552 aa9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 INTS7Q9NVH2 962 aaKnown RBP9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 ZNF282Q9UDV7 671 aaPredicted RBP9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 C3orf18Q9UK00 162 aa9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 MRPS2Q9Y399 296 aaKnown RBP9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 KLK4Q9Y5K2 254 aa9.51□□□□□ -0.89
CALCOCO2-227ENST00000575560 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.51□□□□□ -0.895e-7■■■□□ 16.5
CALCOCO2-227ENST00000575560 IGHV1-45A0A0A0MS14 117 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 MROH6A6NGR9 719 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 GOLGA6L22H0YM25 854 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 SLC19A2O60779 497 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 GPC4O75487 556 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 FKBP9O95302 570 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 F10P00742 488 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 OR56A5P0C7T3 313 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 TPH1P17752 444 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 CCR7P32248 378 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 MARCKSL1P49006 195 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 HADHBP55084 474 aaKnown RBP9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 VSX2P58304 361 aaPredicted RBP9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 RBPJQ06330 500 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 FRMPD2BQ6IN97 320 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 VRK3Q8IV63 474 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 PRSS58Q8IYP2 241 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 ACBD4Q8NC06 268 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 ACTL9Q8TC94 416 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 MTFMTQ96DP5 389 aaKnown RBP9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 SPATA13Q96N96 652 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 IL17FQ96PD4 163 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 PPP1R2P1Q96PQ5 205 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 SPOCK3Q9BQ16 436 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 FERMT1Q9BQL6 677 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 GOLPH3Q9H4A6 298 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 NHEJ1Q9H9Q4 299 aaPredicted RBP9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 IFNKQ9P0W0 207 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 SH3BGRL2Q9UJC5 107 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 INTUQ9ULD6 942 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 ZNF835Q9Y2P0 537 aa9.5□□□□□ -0.89
CALCOCO2-227ENST00000575560 NCOA6Q14686 2063 aaPredicted RBP9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 LOC102723996A0A087X1L8 192 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 LOC105369274A0A096LPK9 316 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 LOC102723532A0A0G2JNH3 316 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 OR51F1A6NGY5 319 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 IDSB3KWA1 339 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 RASGRF2O14827 1237 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 OR1I1O60431 355 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 PRAMEF2O60811 474 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 WFS1O76024 890 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 CELA2AP08217 269 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 MYBL2P10244 700 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 ITGAMP11215 1152 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 MSNP26038 577 aaKnown RBP9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 FOXN2P32314 431 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 SMSP52788 366 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 EMP2P54851 167 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 TPM4P67936 248 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 C3AR1Q16581 482 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 SYTL3Q4VX76 610 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 HIBCHQ6NVY1 386 aaPredicted RBP9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 Q6ZPB1 254 aaPredicted RBP9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 ARHGEF18Q6ZSZ5 1173 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 CCDC50Q8IVM0 306 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 DCUN1D3Q8IWE4 304 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 OR4N4Q8N0Y3 316 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 AMER2Q8N7J2 671 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 ASZ1Q8WWH4 475 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 POM121Q96HA1 1249 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 CCDC42Q96M95 316 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 ANP32EQ9BTT0 268 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 ZNF700Q9H0M5 742 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 ZNHIT6Q9NWK9 470 aaKnown RBP9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 STMN3Q9NZ72 180 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 STOX2Q9P2F5 926 aaPredicted RBP9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 IMPACTQ9P2X3 320 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 ZC3H7BQ9UGR2 993 aaKnown RBP9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 CIDEBQ9UHD4 219 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 TINAGQ9UJW2 476 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 EFR3BQ9Y2G0 817 aa9.49□□□□□ -0.89
CALCOCO2-227ENST00000575560 CCDC162PA2VCL2 907 aa9.48□□□□□ -0.89
CALCOCO2-227ENST00000575560 OR5H15A6NDH6 313 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms