RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 KCTD13Q8WZ19 329 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 PCED1BQ96HM7 432 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 DIRAS2Q96HU8 199 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 EGFL8Q99944 293 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 AIG1Q9NVV5 245 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 GPR45Q9Y5Y3 372 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 ZFC3H1O60293 1989 aaKnown RBP9.35□□□□□ -0.91
CCDC40-212ENST00000574799 FAM240BA0A1B0GVZ2 78 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 FFAR3O14843 346 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 GPR42O15529 346 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 KIAA0513O60268 411 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 TPPPO94811 219 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 PIRTP0C851 137 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 G6PDP11413 515 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 ITGA2P17301 1181 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 GGT1P19440 569 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 DDOSTP39656 456 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 PRSS48Q7RTY5 328 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 ISCA2Q86U28 154 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 ZNF598Q86UK7 904 aaKnown RBP9.35□□□□□ -0.91
CCDC40-212ENST00000574799 YIPF6Q96EC8 236 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 GON7Q9BXV9 100 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 ULBP1Q9BZM6 244 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 CSNK1G1Q9HCP0 422 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 TM9SF3Q9HD45 589 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 GALPQ9UBC7 116 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 PKP3Q9Y446 797 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 TIMM13Q9Y5L4 95 aaPredicted RBP9.35□□□□□ -0.91
CCDC40-212ENST00000574799 YJEFN3A6XGL0 299 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 ERVH48-1M5A8F1 160 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 SCELO95171 688 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 CHRM5P08912 532 aaPredicted RBP9.35□□□□□ -0.91
CCDC40-212ENST00000574799 RPS3P23396 243 aaKnown RBP eCLIP9.35□□□□□ -0.91
CCDC40-212ENST00000574799 RYKP34925 604 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 FLT3LGP49771 235 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 TAF6P49848 677 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 SLC35A2P78381 396 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 SUZ12Q15022 739 aaKnown RBP9.35□□□□□ -0.91
CCDC40-212ENST00000574799 TSNQ15631 228 aaKnown RBP9.35□□□□□ -0.91
CCDC40-212ENST00000574799 TIGD5Q53EQ6 642 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 COQ5Q5HYK3 327 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 PAMR1Q6UXH9 720 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 TIGD4Q8IY51 512 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 OR10T2Q8NGX3 314 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 ANGPTL6Q8NI99 470 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 ZNF675Q8TD23 568 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 NUDT8Q8WV74 236 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 PYCR2Q96C36 320 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 OR52E6Q96RD3 313 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 ABCG8Q9H221 673 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 NARFLQ9H6Q4 476 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 SYTL2Q9HCH5 934 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 OSGIN1Q9UJX0 560 aa9.35□□□□□ -0.91
CCDC40-212ENST00000574799 OBSL1O75147 1896 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 A8MUA0 341 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 A8MX80 341 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 PLK4O00444 970 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 CDK2AP1O14519 115 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 CREG1O75629 220 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 VIPP01282 170 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 ASGR1P07306 291 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 OLR1P78380 273 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 PRKCDQ05655 676 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 GALNT1Q10472 559 aaPredicted RBP9.34□□□□□ -0.91
CCDC40-212ENST00000574799 PWP1Q13610 501 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 ZNF284Q2VY69 593 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 CDONQ4KMG0 1287 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 FAM205BPQ63HN1 556 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 UBE2Q1Q7Z7E8 422 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 ANKRD46Q86W74 232 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 SLC13A3Q8WWT9 602 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 PTERQ96BW5 349 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 ELOVL6Q9H5J4 265 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 ATP13A2Q9NQ11 1180 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 OLA1Q9NTK5 396 aaKnown RBP9.34□□□□□ -0.91
CCDC40-212ENST00000574799 MALT1Q9UDY8 824 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 CLDN24A6NM45 220 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 CA12O43570 354 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 PSIP1O75475 530 aaKnown RBP9.34□□□□□ -0.91
CCDC40-212ENST00000574799 ARHGEF15O94989 841 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 CTSHP09668 335 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 BMP1P13497 986 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 KRT20P35900 424 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 CDKN2DP55273 166 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 KCNA10Q16322 511 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 TSTQ16762 297 aaKnown RBP9.34□□□□□ -0.91
CCDC40-212ENST00000574799 C6orf136Q5SQH8 315 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 ZNF57Q68EA5 555 aaPredicted RBP9.34□□□□□ -0.91
CCDC40-212ENST00000574799 C8orf82Q6P1X6 216 aaPredicted RBP9.34□□□□□ -0.91
CCDC40-212ENST00000574799 FAM171BQ6P995 826 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 TSPEARQ8WU66 669 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 SIPA1Q96FS4 1042 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 KCNC2Q96PR1 638 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 ATP6V1HQ9UI12 483 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 ZNF490Q9ULM2 529 aaPredicted RBP9.34□□□□□ -0.91
CCDC40-212ENST00000574799 CLCA3PQ9Y6N3 262 aa9.34□□□□□ -0.91
CCDC40-212ENST00000574799 SMIM30A4D0T7 59 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 FABP12A6NFH5 140 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 DCLK1O15075 740 aa9.34□□□□□ -0.92
CCDC40-212ENST00000574799 SEC22BO75396 215 aa9.34□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms