RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 TMEM233B4DJY2 109 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 ITGAXP20702 1163 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 YPEL5P62699 121 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 LRP8Q14114 963 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 PCLAFQ15004 111 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 SMAD2Q15796 467 aaKnown RBP9.83□□□□□ -0.84
SMG6-213ENST00000573166 RNF43Q68DV7 783 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 KIAA1211LQ6NV74 962 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 PRMT9Q6P2P2 845 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 BNIPLQ7Z465 357 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 SLC13A3Q8WWT9 602 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 METTL21AQ8WXB1 218 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 ZDHHC12Q96GR4 267 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 ZNF317Q96PQ6 595 aaPredicted RBP9.83□□□□□ -0.84
SMG6-213ENST00000573166 TXLNGYQ9BZA5 131 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 C6orf106Q9H6K1 298 aaPredicted RBP9.83□□□□□ -0.84
SMG6-213ENST00000573166 KLHL28Q9NXS3 571 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 OARD1Q9Y530 152 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 PRSS21Q9Y6M0 314 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 TTC28Q96AY4 2481 aa9.83□□□□□ -0.84
SMG6-213ENST00000573166 TYROBPO43914 113 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 SLC16A8O95907 504 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 TCF3P15923 654 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 PIK3R1P27986 724 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 MPP2Q14168 576 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 HEPACAMQ14CZ8 416 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 DUS1LQ6P1R4 473 aaKnown RBP9.82□□□□□ -0.84
SMG6-213ENST00000573166 DDHD1Q8NEL9 900 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 OR5AR1Q8NGP9 310 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 NSMCE2Q96MF7 247 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 LRRC3BQ96PB8 259 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 TGM7Q96PF1 710 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 CCDC28BQ9BUN5 200 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 RAD21L1Q9H4I0 556 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 FBRSL1Q9HCM7 1045 aaKnown RBP9.82□□□□□ -0.84
SMG6-213ENST00000573166 RNF11Q9Y3C5 154 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 ZNF638Q14966 1978 aaKnown RBP9.82□□□□□ -0.84
SMG6-213ENST00000573166 SHROOM3Q8TF72 1996 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 GPR89AB7ZAQ6 455 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 CISD3P0C7P0 127 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 GPR89BP0CG08 455 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 PSMA4P25789 261 aaKnown RBP9.82□□□□□ -0.84
SMG6-213ENST00000573166 CCR7P32248 378 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 RAB28P51157 221 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 KCNC3Q14003 757 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 LEXMQ3ZCV2 418 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 TMEM52BQ4KMG9 183 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 ANXA8L1Q5VT79 327 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 METTL21CQ5VZV1 264 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 GCNT7Q6ZNI0 430 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 ZNF683Q8IZ20 524 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 NELL1Q92832 810 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 RCN3Q96D15 328 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 TEX12Q9BXU0 123 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 DLGAP2Q9P1A6 1054 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 OR51B4Q9Y5P0 310 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 LRRC37A2A6NM11 1700 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 SPTBN2O15020 2390 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 EIF3FO00303 357 aaPredicted RBP9.82□□□□□ -0.84
SMG6-213ENST00000573166 PRPS2P11908 318 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 CPN2P22792 545 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 AFF3P51826 1226 aaKnown RBP9.82□□□□□ -0.84
SMG6-213ENST00000573166 RAB8AP61006 207 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 TBPL1P62380 186 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 ZNF678Q5SXM1 525 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 TMEM215Q68D42 235 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 UNC5DQ6UXZ4 953 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 ISCA2Q86U28 154 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 RASGRP3Q8IV61 690 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 TBC1D21Q8IYX1 336 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 CAMKK1Q8N5S9 505 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 RP9Q8TA86 221 aaKnown RBP9.82□□□□□ -0.84
SMG6-213ENST00000573166 RBM18Q96H35 190 aaKnown RBP9.82□□□□□ -0.84
SMG6-213ENST00000573166 FAM129BQ96TA1 746 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 DPH7Q9BTV6 452 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 BRINP2Q9C0B6 783 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 ROGDIQ9GZN7 287 aa9.82□□□□□ -0.84
SMG6-213ENST00000573166 KHNYNO15037 678 aaKnown RBP9.81□□□□□ -0.84
SMG6-213ENST00000573166 DUX1O43812 170 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 B3GALT2O43825 422 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 PDE5AO76074 875 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 EBLN1P0CF75 366 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 AVPR1BP47901 424 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 KLF10Q13118 480 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 SLC9A5Q14940 896 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 OR4D1Q15615 310 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 ZC3H12BQ5HYM0 836 aaKnown RBP9.81□□□□□ -0.84
SMG6-213ENST00000573166 SAMD4BQ5PRF9 694 aaKnown RBP9.81□□□□□ -0.84
SMG6-213ENST00000573166 PPP4R4Q6NUP7 873 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 TSSK4Q6SA08 328 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 ETFBKMTQ8IXQ9 262 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 LIX1Q8N485 282 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 SPPL2AQ8TCT8 520 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 NSUN5Q96P11 429 aaKnown RBP9.81□□□□□ -0.84
SMG6-213ENST00000573166 TTYH1Q9H313 450 aaPredicted RBP9.81□□□□□ -0.84
SMG6-213ENST00000573166 OR51B5Q9H339 312 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 DDX18Q9NVP1 670 aaKnown RBP9.81□□□□□ -0.84
SMG6-213ENST00000573166 ZDHHC2Q9UIJ5 367 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 PDE10AQ9Y233 779 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 THSD7BQ9C0I4 1608 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms