RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 SHISA6Q6ZSJ9 500 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 GALNT16Q8N428 558 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 METTL27Q8N6F8 245 aaPredicted RBP17.34■□□□□ 0.37
CHD3-214ENST00000572579 TRIM58Q8NG06 486 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 GIMAP7Q8NHV1 300 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 INPP5DQ92835 1189 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 ZUFSPQ96AP4 578 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 C17orf62Q9BQA9 187 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 CTSFQ9UBX1 484 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 NDOR1Q9UHB4 597 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 PPP2R2CQ9Y2T4 447 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 IGKV1-8A0A0C4DH67 115 aa17.33■□□□□ 0.36
CHD3-214ENST00000572579 BLACEA4D250 179 aa17.33■□□□□ 0.36
CHD3-214ENST00000572579 ARHGEF33A8MVX0 844 aa17.33■□□□□ 0.36
CHD3-214ENST00000572579 TARM1B6A8C7 271 aa17.33■□□□□ 0.36
CHD3-214ENST00000572579 DSCR3O14972 297 aa17.33■□□□□ 0.36
CHD3-214ENST00000572579 KDM1AO60341 852 aa17.33■□□□□ 0.36
CHD3-214ENST00000572579 ERGP11308 486 aa17.33■□□□□ 0.36
CHD3-214ENST00000572579 ADARP55265 1226 aaKnown RBP17.33■□□□□ 0.36
CHD3-214ENST00000572579 SNRPNP63162 240 aaKnown RBP17.33■□□□□ 0.36
CHD3-214ENST00000572579 MRPL49Q13405 166 aaKnown RBP17.33■□□□□ 0.36
CHD3-214ENST00000572579 WASHC2DQ5SRD0 308 aa17.33■□□□□ 0.36
CHD3-214ENST00000572579 VWA5B1Q5TIE3 1220 aa17.33■□□□□ 0.36
CHD3-214ENST00000572579 HIST2H2BCQ6DN03 193 aa17.33■□□□□ 0.36
CHD3-214ENST00000572579 KIAA0930Q6ICG6 404 aaPredicted RBP17.33■□□□□ 0.36
CHD3-214ENST00000572579 NEPROQ6NW34 567 aa17.33■□□□□ 0.36
CHD3-214ENST00000572579 KIRREL2Q6UWL6 708 aa17.33■□□□□ 0.36
CHD3-214ENST00000572579 CILP2Q8IUL8 1156 aa17.33■□□□□ 0.36
CHD3-214ENST00000572579 RASGEF1CQ8N431 466 aa17.33■□□□□ 0.36
CHD3-214ENST00000572579 SKA2Q8WVK7 121 aaPredicted RBP17.33■□□□□ 0.36
CHD3-214ENST00000572579 PNPLA2Q96AD5 504 aa17.33■□□□□ 0.36
CHD3-214ENST00000572579 FER1L6-AS2Q96M78 137 aa17.33■□□□□ 0.36
CHD3-214ENST00000572579 SELENOSQ9BQE4 189 aa17.33■□□□□ 0.36
CHD3-214ENST00000572579 SLC6A20Q9NP91 592 aa17.33■□□□□ 0.36
CHD3-214ENST00000572579 MAU2Q9Y6X3 613 aa17.33■□□□□ 0.36
CHD3-214ENST00000572579 A0A0J9YVX5 310 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 ZCWPW2A0A1B0GU75 182 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 VSTM2BA6NLU5 285 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 AP3B1O00203 1094 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 KPNA5O15131 536 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 VPS4BO75351 444 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 KRT14P02533 472 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 MMP11P24347 488 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 CLCN7P51798 805 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 ARSFP54793 590 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 VSX2P58304 361 aaPredicted RBP17.32■□□□□ 0.36
CHD3-214ENST00000572579 MYBPC3Q14896 1274 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 ANKRD20A4Q4UJ75 823 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 ZC3H12BQ5HYM0 836 aaKnown RBP17.32■□□□□ 0.36
CHD3-214ENST00000572579 MRNIPQ6NTE8 343 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 IGFL3Q6UXB1 125 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 CYHR1Q6ZMK1 362 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 SDCCAG8Q86SQ7 713 aaPredicted RBP17.32■□□□□ 0.36
CHD3-214ENST00000572579 DENND6AQ8IWF6 608 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 AMER2Q8N7J2 671 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 MAIP1Q8WWC4 291 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 FKBP10Q96AY3 582 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 SNRNP40Q96DI7 357 aaKnown RBP17.32■□□□□ 0.36
CHD3-214ENST00000572579 IP6K3Q96PC2 410 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 TCF12Q99081 682 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 SLC26A1Q9H2B4 701 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 C5AR2Q9P296 337 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 FBXL4Q9UKA2 621 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 VPS4AQ9UN37 437 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 CSAG2Q9Y5P2 127 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 HS3ST3B1Q9Y662 390 aa17.32■□□□□ 0.36
CHD3-214ENST00000572579 OR2A25A4D2G3 310 aa17.31■□□□□ 0.36
CHD3-214ENST00000572579 GOLGA6L6A8MZA4 724 aa17.31■□□□□ 0.36
CHD3-214ENST00000572579 AGPSO00116 658 aa17.31■□□□□ 0.36
CHD3-214ENST00000572579 PEX12O00623 359 aa17.31■□□□□ 0.36
CHD3-214ENST00000572579 PSIP1O75475 530 aaKnown RBP17.31■□□□□ 0.36
CHD3-214ENST00000572579 ALBP02768 609 aa17.31■□□□□ 0.36
CHD3-214ENST00000572579 ESR1P03372 595 aa17.31■□□□□ 0.36
CHD3-214ENST00000572579 OGNP20774 298 aaKnown RBP17.31■□□□□ 0.36
CHD3-214ENST00000572579 ATP5DP30049 168 aa17.31■□□□□ 0.36
CHD3-214ENST00000572579 Q0VFX4 171 aa17.31■□□□□ 0.36
CHD3-214ENST00000572579 GRM7Q14831 915 aa17.31■□□□□ 0.36
CHD3-214ENST00000572579 KLHL38Q2WGJ6 581 aa17.31■□□□□ 0.36
CHD3-214ENST00000572579 SUSD1Q6UWL2 747 aa17.31■□□□□ 0.36
CHD3-214ENST00000572579 RNF44Q7L0R7 432 aa17.31■□□□□ 0.36
CHD3-214ENST00000572579 SHISA5Q8N114 240 aa17.31■□□□□ 0.36
CHD3-214ENST00000572579 OTUD6BQ8N6M0 293 aa17.31■□□□□ 0.36
CHD3-214ENST00000572579 EFCAB3Q8N7B9 438 aa17.31■□□□□ 0.36
CHD3-214ENST00000572579 OR9A1PQ8NGU1 263 aa17.31■□□□□ 0.36
CHD3-214ENST00000572579 DLG3Q92796 817 aa17.31■□□□□ 0.36
CHD3-214ENST00000572579 MAGOHBQ96A72 148 aaKnown RBP17.31■□□□□ 0.36
CHD3-214ENST00000572579 C10orf90Q96M02 699 aa17.31■□□□□ 0.36
CHD3-214ENST00000572579 PKP4Q99569 1192 aa17.31■□□□□ 0.36
CHD3-214ENST00000572579 ACAT2Q9BWD1 397 aa17.31■□□□□ 0.36
CHD3-214ENST00000572579 SOX17Q9H6I2 414 aaPredicted RBP17.31■□□□□ 0.36
CHD3-214ENST00000572579 HOMER3Q9NSC5 361 aa17.31■□□□□ 0.36
CHD3-214ENST00000572579 INTS7Q9NVH2 962 aaKnown RBP17.31■□□□□ 0.36
CHD3-214ENST00000572579 ICE1Q9Y2F5 2266 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 FAM237BA0A1B0GVD1 139 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 HYKKA2RU49 373 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 GOLGA8MH3BSY2 632 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 MYO1CO00159 1063 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 SRPX2O60687 465 aaPredicted RBP17.3■□□□□ 0.36
CHD3-214ENST00000572579 CD63P08962 238 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 GP1BBP13224 206 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms