RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 CLDN7O95471 211 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 STATHP02808 62 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 SERPINA7P05543 415 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 PDHA1P08559 390 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 ALAS2P22557 587 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 FDXRP22570 491 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 PTGS2P35354 604 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 ARHGAP25P42331 645 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 KLK7P49862 253 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 NR0B1P51843 470 aaKnown RBP6.58□□□□□ -1.36
CHD3-213ENST00000571249 TMPRSS15P98073 1019 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 CETN1Q12798 172 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 RFTN1Q14699 578 aaPredicted RBP6.58□□□□□ -1.36
CHD3-213ENST00000571249 NKG7Q16617 165 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 ASTE1Q2TB18 679 aaPredicted RBP6.58□□□□□ -1.36
CHD3-213ENST00000571249 TFDP3Q5H9I0 405 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 EMC4Q5J8M3 183 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 HENMT1Q5T8I9 393 aaKnown RBP6.58□□□□□ -1.36
CHD3-213ENST00000571249 SYT10Q6XYQ8 523 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 ARHGAP36Q6ZRI8 547 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 OVCH1Q7RTY7 1134 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 CREBRFQ8IUR6 639 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 ZNF547Q8IVP9 402 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 NDUFAF2Q8N183 169 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 EMC1Q8N766 993 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 OR10Q1Q8NGQ4 319 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 FAM57AQ8TBR7 257 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 C8orf44Q96CB5 159 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 C18orf8Q96DM3 657 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 SCYL1Q96KG9 808 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 PSKH2Q96QS6 385 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 TM9SF2Q99805 663 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 GANQ9H2C0 597 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 HAUS4Q9H6D7 363 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 WDR54Q9H977 334 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 IMP3Q9NV31 184 aaKnown RBP6.58□□□□□ -1.36
CHD3-213ENST00000571249 ZNHIT6Q9NWK9 470 aaKnown RBP6.58□□□□□ -1.36
CHD3-213ENST00000571249 IRAK4Q9NWZ3 460 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 TAS2R14Q9NYV8 317 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 AIPL1Q9NZN9 384 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 TMEM59LQ9UK28 342 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 PSMD13Q9UNM6 376 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 PCDHB14Q9Y5E9 798 aa6.58□□□□□ -1.36
CHD3-213ENST00000571249 CFAP20Q9Y6A4 193 aaKnown RBP6.58□□□□□ -1.36
CHD3-213ENST00000571249 NSG1A0A0A6YYJ2 146 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 ARHGAP42A6NI28 874 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 GPR89AB7ZAQ6 455 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 IFRD1O00458 451 aaPredicted RBP6.57□□□□□ -1.36
CHD3-213ENST00000571249 MAP2K7O14733 419 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 RASGRF2O14827 1237 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 EPHB6O15197 1021 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 P4HA2O15460 535 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 ZSCAN9O15535 394 aaPredicted RBP6.57□□□□□ -1.36
CHD3-213ENST00000571249 PJA2O43164 708 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 CD5LO43866 347 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 SASH3O75995 380 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 ALBP02768 609 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 TP53P04637 393 aaPredicted RBP6.57□□□□□ -1.36
CHD3-213ENST00000571249 GPR89BP0CG08 455 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 MTHFD1P11586 935 aaKnown RBP6.57□□□□□ -1.36
CHD3-213ENST00000571249 ACPPP15309 386 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 VCLP18206 1134 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 HLA-DPA1P20036 260 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 ITGAXP20702 1163 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 TACR1P25103 407 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 PRDX3P30048 256 aaKnown RBP6.57□□□□□ -1.36
CHD3-213ENST00000571249 CYLC1P35663 651 aaPredicted RBP6.57□□□□□ -1.36
CHD3-213ENST00000571249 NSG1P42857 185 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 NEK2P51955 445 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 ZNF33BQ06732 778 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 SLC10A7Q0GE19 358 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 XRCC4Q13426 336 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 DEFB110Q30KQ9 67 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 CCDC14Q49A88 953 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 C2CD6Q53TS8 623 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 ABHD17BQ5VST6 288 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 TXNRD3NBQ6F5E7 133 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 KIAA0930Q6ICG6 404 aaPredicted RBP6.57□□□□□ -1.36
CHD3-213ENST00000571249 NEK10Q6ZWH5 1172 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.57□□□□□ -1.36
CHD3-213ENST00000571249 PAQR7Q86WK9 346 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 NEK11Q8NG66 645 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 OR4E2Q8NGC2 313 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 PPP1R14CQ8TAE6 165 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 LINC01560Q8TB33 94 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 FKBP10Q96AY3 582 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 SIGLEC12Q96PQ1 595 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 NUDCD1Q96RS6 583 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 DESI2Q9BSY9 194 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 TRIM7Q9C029 511 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 DEF6Q9H4E7 631 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 NHEJ1Q9H9Q4 299 aaPredicted RBP6.57□□□□□ -1.36
CHD3-213ENST00000571249 FAM60AQ9NP50 221 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 ZIM2Q9NZV7 527 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 SLC24A2Q9UI40 661 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 MKL2Q9ULH7 1088 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 FREM1Q5H8C1 2179 aa6.57□□□□□ -1.36
CHD3-213ENST00000571249 A0A0G2JNJ9 132 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 A0A0J9YYE9 177 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 LRRC53A6NM62 1247 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms